RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NCAPG2Q86XI2 1143 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 PI4K2BQ8TCG2 481 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 STRBPQ96SI9 672 aaKnown RBP12.37□□□□□ -0.43
TTC28-207ENST00000490475 NACAP1Q9BZK3 213 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 PUS7LQ9H0K6 701 aaKnown RBP12.37□□□□□ -0.43
TTC28-207ENST00000490475 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 PRKAG2Q9UGJ0 569 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 DIS3Q9Y2L1 958 aaKnown RBP12.37□□□□□ -0.43
TTC28-207ENST00000490475 PFASO15067 1338 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 ROBO3Q96MS0 1386 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 RNF113AO15541 343 aaKnown RBP12.36□□□□□ -0.43
TTC28-207ENST00000490475 SEPT4O43236 478 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 SLC3A2P08195 630 aaKnown RBP12.36□□□□□ -0.43
TTC28-207ENST00000490475 CYBAP13498 195 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 EEF2P13639 858 aaKnown RBP12.36□□□□□ -0.43
TTC28-207ENST00000490475 KCTD2Q14681 263 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 CHD1LQ86WJ1 897 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 SPICE1Q8N0Z3 855 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 NPLOC4Q8TAT6 608 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 ADAMTS5Q9UNA0 930 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 ZNFX1Q9P2E3 1918 aaKnown RBP12.36□□□□□ -0.43
TTC28-207ENST00000490475 PARP14Q460N5 1801 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 SALL3Q9BXA9 1300 aa12.36□□□□□ -0.43
TTC28-207ENST00000490475 IGHA2P01877 340 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 CYP2C19P33261 490 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 STAT3P40763 770 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 TDO2P48775 406 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 PDE1AP54750 535 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 LRIT3Q3SXY7 679 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 RIOX2Q8IUF8 465 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 SIAH1Q8IUQ4 282 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 TDHQ8IZJ6 230 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 ZNF444Q8N0Y2 327 aaPredicted RBP12.35□□□□□ -0.43
TTC28-207ENST00000490475 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
TTC28-207ENST00000490475 ATG4CQ96DT6 458 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 LBHD1Q9BQE6 289 aaPredicted RBP12.35□□□□□ -0.43
TTC28-207ENST00000490475 FLRT1Q9NZU1 646 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 PPP1R9AQ9ULJ8 1098 aa12.35□□□□□ -0.43
TTC28-207ENST00000490475 ZMYND8Q9ULU4 1186 aaPredicted RBP12.35□□□□□ -0.43
TTC28-207ENST00000490475 GSG1L2A8MUP6 293 aa12.34□□□□□ -0.43
TTC28-207ENST00000490475 VWA5AO00534 786 aa12.34□□□□□ -0.43
TTC28-207ENST00000490475 RAD21O60216 631 aa12.34□□□□□ -0.43
TTC28-207ENST00000490475 FDX1P10109 184 aa12.34□□□□□ -0.43
TTC28-207ENST00000490475 MAGEA10P43363 369 aaPredicted RBP12.34□□□□□ -0.43
TTC28-207ENST00000490475 PDE4BQ07343 736 aa12.34□□□□□ -0.43
TTC28-207ENST00000490475 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
TTC28-207ENST00000490475 PRPF38AQ8NAV1 312 aaKnown RBP12.34□□□□□ -0.43
TTC28-207ENST00000490475 MMP19Q99542 508 aa12.34□□□□□ -0.43
TTC28-207ENST00000490475 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
TTC28-207ENST00000490475 SENP6Q9GZR1 1112 aaPredicted RBP12.34□□□□□ -0.43
TTC28-207ENST00000490475 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
TTC28-207ENST00000490475 GREB1LQ9C091 1923 aaPredicted RBP12.33□□□□□ -0.44
TTC28-207ENST00000490475 CYP2D7A0A087X1C5 515 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 PATL2C9JE40 543 aaKnown RBP12.33□□□□□ -0.44
TTC28-207ENST00000490475 GPAA1O43292 621 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 APPP05067 770 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 RASA1P20936 1047 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 EVX2Q03828 476 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 LRRC26Q2I0M4 334 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 KIAA1755Q5JYT7 1200 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 OSBP2Q969R2 916 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 MAML3Q96JK9 1138 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 TEX13BQ9BXU2 312 aa12.33□□□□□ -0.44
TTC28-207ENST00000490475 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
TTC28-207ENST00000490475 F5H6K3 240 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 ATP2A1O14983 1001 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 COBLO75128 1261 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 RARBP10826 455 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 SYN1P17600 705 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 KLRC3Q07444 240 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 FAM83BQ5T0W9 1011 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
TTC28-207ENST00000490475 MKL1Q969V6 931 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 FBXO40Q9UH90 709 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 FEM1BQ9UK73 627 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 ZNF214Q9UL59 606 aaPredicted RBP12.32□□□□□ -0.44
TTC28-207ENST00000490475 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 MYH4Q9Y623 1939 aa12.32□□□□□ -0.44
TTC28-207ENST00000490475 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 ZBED4O75132 1171 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 TTLL1O95922 423 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 PDE4AP27815 886 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 OAZ1P54368 228 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 RNF180Q86T96 592 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 CLEC10AQ8IUN9 316 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 GMCL1P1Q8NEA9 526 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 FSD1Q9BTV5 496 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 NAPBQ9H115 298 aa12.31□□□□□ -0.44
TTC28-207ENST00000490475 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
TTC28-207ENST00000490475 TSPY3P0CV98 308 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms