RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 MAML3Q96JK9 1138 aa18.79■□□□□ 0.6
NUP58-213ENST00000490231 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.79■□□□□ 0.6
NUP58-213ENST00000490231 DCTPP1Q9H773 170 aa18.79■□□□□ 0.6
NUP58-213ENST00000490231 GSG1L2A8MUP6 293 aa18.78■□□□□ 0.6
NUP58-213ENST00000490231 VWA5AO00534 786 aa18.78■□□□□ 0.6
NUP58-213ENST00000490231 ATN1P54259 1190 aaPredicted RBP18.78■□□□□ 0.6
NUP58-213ENST00000490231 GJC2Q5T442 439 aaPredicted RBP18.78■□□□□ 0.6
NUP58-213ENST00000490231 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
NUP58-213ENST00000490231 APPBP2Q92624 585 aa18.78■□□□□ 0.6
NUP58-213ENST00000490231 FBXO28Q9NVF7 368 aa18.78■□□□□ 0.6
NUP58-213ENST00000490231 NRBP1Q9UHY1 535 aa18.78■□□□□ 0.6
NUP58-213ENST00000490231 PPP1R9AQ9ULJ8 1098 aa18.78■□□□□ 0.6
NUP58-213ENST00000490231 ROBO3Q96MS0 1386 aa18.78■□□□□ 0.6
NUP58-213ENST00000490231 MYH8P13535 1937 aa18.77■□□□□ 0.6
NUP58-213ENST00000490231 BAZ2AQ9UIF9 1905 aaKnown RBP18.77■□□□□ 0.6
NUP58-213ENST00000490231 KBTBD13C9JR72 458 aa18.77■□□□□ 0.6
NUP58-213ENST00000490231 ZFYP08048 801 aaPredicted RBP18.77■□□□□ 0.6
NUP58-213ENST00000490231 RASA1P20936 1047 aa18.77■□□□□ 0.6
NUP58-213ENST00000490231 COPB2P35606 906 aa18.77■□□□□ 0.6
NUP58-213ENST00000490231 STAT3P40763 770 aa18.77■□□□□ 0.6
NUP58-213ENST00000490231 MDM2Q00987 491 aaPredicted RBP18.77■□□□□ 0.6
NUP58-213ENST00000490231 OSBP2Q969R2 916 aa18.77■□□□□ 0.6
NUP58-213ENST00000490231 MMP19Q99542 508 aa18.77■□□□□ 0.6
NUP58-213ENST00000490231 DIS3Q9Y2L1 958 aaKnown RBP18.77■□□□□ 0.6
NUP58-213ENST00000490231 RNF113AO15541 343 aaKnown RBP18.76■□□□□ 0.59
NUP58-213ENST00000490231 RTP1P59025 263 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 KCTD2Q14681 263 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 PRAMEF19Q5SWL8 479 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 FAM83BQ5T0W9 1011 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 SLC39A5Q6ZMH5 540 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 REPS2Q8NFH8 660 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 LBHD1Q9BQE6 289 aaPredicted RBP18.76■□□□□ 0.59
NUP58-213ENST00000490231 MKNK2Q9HBH9 465 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 NYAP2Q9P242 653 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 PRKAG2Q9UGJ0 569 aa18.76■□□□□ 0.59
NUP58-213ENST00000490231 ZNF214Q9UL59 606 aaPredicted RBP18.76■□□□□ 0.59
NUP58-213ENST00000490231 MYH7P12883 1935 aa18.75■□□□□ 0.59
NUP58-213ENST00000490231 GNAT2P19087 354 aa18.75■□□□□ 0.59
NUP58-213ENST00000490231 ANO1Q5XXA6 986 aa18.75■□□□□ 0.59
NUP58-213ENST00000490231 DEFB123Q8N688 67 aa18.75■□□□□ 0.59
NUP58-213ENST00000490231 PARP14Q460N5 1801 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 MINDY4BA8MYZ0 360 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 GPAA1O43292 621 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 RAD21O60216 631 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 PGK2P07205 417 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 SNX17Q15036 470 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 LRRC41Q15345 812 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 ZNF792Q3KQV3 632 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 TINF2Q9BSI4 451 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 ZNF287Q9HBT7 754 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 ATP11BQ9Y2G3 1177 aa18.74■□□□□ 0.59
NUP58-213ENST00000490231 GREB1LQ9C091 1923 aaPredicted RBP18.73■□□□□ 0.59
NUP58-213ENST00000490231 F5H6K3 240 aa18.73■□□□□ 0.59
NUP58-213ENST00000490231 KLRC3Q07444 240 aa18.73■□□□□ 0.59
NUP58-213ENST00000490231 LRRFIP1Q32MZ4 808 aaKnown RBP18.73■□□□□ 0.59
NUP58-213ENST00000490231 FAM47AQ5JRC9 791 aa18.73■□□□□ 0.59
NUP58-213ENST00000490231 C1orf53Q5VUE5 145 aa18.73■□□□□ 0.59
NUP58-213ENST00000490231 TSHZ3Q63HK5 1081 aa18.73■□□□□ 0.59
NUP58-213ENST00000490231 SLF1Q9BQI6 1058 aa18.73■□□□□ 0.59
NUP58-213ENST00000490231 EPB41L4AQ9HCS5 686 aaPredicted RBP18.73■□□□□ 0.59
NUP58-213ENST00000490231 IGKV6D-41A0A0C4DH26 115 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 NDUFB10O96000 172 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 RARBP10826 455 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 ADCYAP1R1P41586 468 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 TDO2P48775 406 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 Q7L0L9 218 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 PRPF38AQ8NAV1 312 aaKnown RBP18.72■□□□□ 0.59
NUP58-213ENST00000490231 SLC17A8Q8NDX2 589 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 NUP88Q99567 741 aaPredicted RBP18.72■□□□□ 0.59
NUP58-213ENST00000490231 TEX13BQ9BXU2 312 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 MTMR10Q9NXD2 777 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 SYNPO2Q9UMS6 1093 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 TTC41PQ6P2S7 1318 aa18.72■□□□□ 0.59
NUP58-213ENST00000490231 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
NUP58-213ENST00000490231 ATP2A1O14983 1001 aa18.71■□□□□ 0.59
NUP58-213ENST00000490231 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
NUP58-213ENST00000490231 ZNF444Q8N0Y2 327 aaPredicted RBP18.71■□□□□ 0.59
NUP58-213ENST00000490231 STK11IPQ8N1F8 1099 aa18.71■□□□□ 0.59
NUP58-213ENST00000490231 MSL3Q8N5Y2 521 aaKnown RBP18.71■□□□□ 0.59
NUP58-213ENST00000490231 MKL1Q969V6 931 aa18.71■□□□□ 0.59
NUP58-213ENST00000490231 XPNPEP3Q9NQH7 507 aa18.71■□□□□ 0.59
NUP58-213ENST00000490231 CLIP2Q9UDT6 1046 aa18.71■□□□□ 0.59
NUP58-213ENST00000490231 PHF24Q9UPV7 400 aa18.71■□□□□ 0.59
NUP58-213ENST00000490231 M0R2C6 588 aa18.7■□□□□ 0.58
NUP58-213ENST00000490231 ERC2O15083 957 aa18.7■□□□□ 0.58
NUP58-213ENST00000490231 APPP05067 770 aa18.7■□□□□ 0.58
NUP58-213ENST00000490231 ZNF865P0CJ78 1059 aaPredicted RBP18.7■□□□□ 0.58
NUP58-213ENST00000490231 TRIM60Q495X7 471 aa18.7■□□□□ 0.58
NUP58-213ENST00000490231 SNRNP48Q6IEG0 339 aaKnown RBP18.7■□□□□ 0.58
NUP58-213ENST00000490231 RNF180Q86T96 592 aa18.7■□□□□ 0.58
NUP58-213ENST00000490231 IFNL3Q8IZI9 196 aa18.7■□□□□ 0.58
NUP58-213ENST00000490231 STXBP5LQ9Y2K9 1186 aa18.7■□□□□ 0.58
NUP58-213ENST00000490231 AKR1A1P14550 325 aa18.69■□□□□ 0.58
NUP58-213ENST00000490231 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
NUP58-213ENST00000490231 FAM109BQ6ICB4 259 aaPredicted RBP18.69■□□□□ 0.58
NUP58-213ENST00000490231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.69■□□□□ 0.58
NUP58-213ENST00000490231 FERMT2Q96AC1 680 aa18.69■□□□□ 0.58
NUP58-213ENST00000490231 CEP95Q96GE4 821 aa18.69■□□□□ 0.58
NUP58-213ENST00000490231 NACAP1Q9BZK3 213 aa18.69■□□□□ 0.58
NUP58-213ENST00000490231 MTMR4Q9NYA4 1195 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms