RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 KCNQ5Q9NR82 932 aa30.22■■■□□ 2.43
KCNC4-207ENST00000489935 USP40Q9NVE5 1235 aa30.22■■■□□ 2.43
KCNC4-207ENST00000489935 TOP1P11387 765 aaKnown RBP30.21■■■□□ 2.43
KCNC4-207ENST00000489935 C2CD5Q86YS7 1000 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 RASGRP4Q8TDF6 673 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 VWA3AA6NCI4 1184 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 G3V3G9 751 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 STXBP3O00186 592 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 RXRBP28702 533 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 MCM7P33993 719 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 ARID5BQ14865 1188 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 DCAF8Q5TAQ9 597 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 KANK3Q6NY19 840 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 USP17L2Q6R6M4 530 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 DHX58Q96C10 678 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 BARHL2Q9NY43 387 aa30.21■■■□□ 2.43
KCNC4-207ENST00000489935 TNS1Q9HBL0 1735 aaKnown RBP30.2■■■□□ 2.43
KCNC4-207ENST00000489935 LMOD1P29536 600 aaPredicted RBP30.2■■■□□ 2.43
KCNC4-207ENST00000489935 TPM4P67936 248 aa30.2■■■□□ 2.43
KCNC4-207ENST00000489935 IL17AQ16552 155 aa30.2■■■□□ 2.43
KCNC4-207ENST00000489935 HEATR3Q7Z4Q2 680 aa30.2■■■□□ 2.43
KCNC4-207ENST00000489935 SPZ1Q9BXG8 430 aa30.2■■■□□ 2.43
KCNC4-207ENST00000489935 XPO4Q9C0E2 1151 aaKnown RBP30.2■■■□□ 2.43
KCNC4-207ENST00000489935 IFNKQ9P0W0 207 aa30.2■■■□□ 2.43
KCNC4-207ENST00000489935 PARP1P09874 1014 aaKnown RBP30.19■■■□□ 2.42
KCNC4-207ENST00000489935 DBNDD1Q9H9R9 158 aa30.19■■■□□ 2.42
KCNC4-207ENST00000489935 PCDHA6Q9UN73 950 aa30.19■■■□□ 2.42
KCNC4-207ENST00000489935 PCDHA8Q9Y5H6 950 aa30.19■■■□□ 2.42
KCNC4-207ENST00000489935 CDC42EP5Q6NZY7 148 aa30.19■■■□□ 2.42
KCNC4-207ENST00000489935 LRRC8AQ8IWT6 810 aa30.19■■■□□ 2.42
KCNC4-207ENST00000489935 SMARCE1Q969G3 411 aa30.19■■■□□ 2.42
KCNC4-207ENST00000489935 MYH8P13535 1937 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 SLX4Q8IY92 1834 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 MYL5Q02045 173 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 MORC3Q14149 939 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 HHIPL2Q6UWX4 724 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 C4orf32Q8N8J7 132 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 DAGLBQ8NCG7 672 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 SPATA20Q8TB22 786 aa30.18■■■□□ 2.42
KCNC4-207ENST00000489935 ATP1A3P13637 1013 aa30.17■■■□□ 2.42
KCNC4-207ENST00000489935 APOBEC3HQ6NTF7 200 aaKnown RBP30.17■■■□□ 2.42
KCNC4-207ENST00000489935 FILIP1Q7Z7B0 1213 aa30.17■■■□□ 2.42
KCNC4-207ENST00000489935 SMC2O95347 1197 aa30.17■■■□□ 2.42
KCNC4-207ENST00000489935 SLFN14P0C7P3 912 aa30.17■■■□□ 2.42
KCNC4-207ENST00000489935 AKR1B1P15121 316 aa30.17■■■□□ 2.42
KCNC4-207ENST00000489935 DNTTIP2Q5QJE6 756 aaKnown RBP30.17■■■□□ 2.42
KCNC4-207ENST00000489935 SH3RF1Q7Z6J0 888 aa30.17■■■□□ 2.42
KCNC4-207ENST00000489935 CCDC148Q8NFR7 591 aa30.17■■■□□ 2.42
KCNC4-207ENST00000489935 PLIN4Q96Q06 1357 aa30.16■■■□□ 2.42
KCNC4-207ENST00000489935 USP17L5A8MUK1 530 aa30.16■■■□□ 2.42
KCNC4-207ENST00000489935 TERF1P54274 439 aa30.16■■■□□ 2.42
KCNC4-207ENST00000489935 FANCCQ00597 558 aa30.16■■■□□ 2.42
KCNC4-207ENST00000489935 PODNQ7Z5L7 613 aa30.16■■■□□ 2.42
KCNC4-207ENST00000489935 TEKT1Q969V4 418 aa30.16■■■□□ 2.42
KCNC4-207ENST00000489935 MTMR4Q9NYA4 1195 aa30.16■■■□□ 2.42
KCNC4-207ENST00000489935 H0YIN7 160 aa30.15■■■□□ 2.42
KCNC4-207ENST00000489935 PAGE5Q96GU1 130 aa30.15■■■□□ 2.42
KCNC4-207ENST00000489935 GALNT17Q6IS24 598 aa30.15■■■□□ 2.42
KCNC4-207ENST00000489935 STYK1Q6J9G0 422 aa30.15■■■□□ 2.42
KCNC4-207ENST00000489935 OSBPL5Q9H0X9 879 aaPredicted RBP30.15■■■□□ 2.42
KCNC4-207ENST00000489935 AFMP43652 599 aa30.14■■■□□ 2.42
KCNC4-207ENST00000489935 SCN9AQ15858 1988 aa30.14■■■□□ 2.41
KCNC4-207ENST00000489935 IGKV6D-41A0A0C4DH26 115 aa30.14■■■□□ 2.41
KCNC4-207ENST00000489935 CCDC194A0A1B0GVG4 234 aa30.14■■■□□ 2.41
KCNC4-207ENST00000489935 FANCLQ9NW38 375 aa30.14■■■□□ 2.41
KCNC4-207ENST00000489935 ZNF219Q9P2Y4 722 aaPredicted RBP30.14■■■□□ 2.41
KCNC4-207ENST00000489935 SERPINB13Q9UIV8 391 aa30.14■■■□□ 2.41
KCNC4-207ENST00000489935 SMARCA1P28370 1054 aa30.13■■■□□ 2.41
KCNC4-207ENST00000489935 CHRNA5P30532 468 aa30.13■■■□□ 2.41
KCNC4-207ENST00000489935 CRKP46108 304 aa30.13■■■□□ 2.41
KCNC4-207ENST00000489935 TRIML1Q8N9V2 468 aa30.13■■■□□ 2.41
KCNC4-207ENST00000489935 MLKLQ8NB16 471 aa30.13■■■□□ 2.41
KCNC4-207ENST00000489935 ZMYND12Q9H0C1 365 aa30.13■■■□□ 2.41
KCNC4-207ENST00000489935 ANO8Q9HCE9 1232 aaPredicted RBP30.13■■■□□ 2.41
KCNC4-207ENST00000489935 VAT1LQ9HCJ6 419 aa30.13■■■□□ 2.41
KCNC4-207ENST00000489935 NFIAQ12857 509 aa30.12■■■□□ 2.41
KCNC4-207ENST00000489935 ARL6IP4Q66PJ3 421 aaKnown RBP30.12■■■□□ 2.41
KCNC4-207ENST00000489935 HOMER1Q86YM7 354 aa30.12■■■□□ 2.41
KCNC4-207ENST00000489935 CLEC10AQ8IUN9 316 aa30.12■■■□□ 2.41
KCNC4-207ENST00000489935 UBA5Q9GZZ9 404 aa30.12■■■□□ 2.41
KCNC4-207ENST00000489935 PCDHAC2Q9Y5I4 1007 aa30.12■■■□□ 2.41
KCNC4-207ENST00000489935 PDHBP11177 359 aa30.12■■■□□ 2.41
KCNC4-207ENST00000489935 CASP1P29466 404 aa30.12■■■□□ 2.41
KCNC4-207ENST00000489935 FMR1Q06787 632 aaKnown RBP eCLIP30.12■■■□□ 2.41
KCNC4-207ENST00000489935 RRP36Q96EU6 259 aaKnown RBP30.12■■■□□ 2.41
KCNC4-207ENST00000489935 SHMT1P34896 483 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 E2F4Q16254 413 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 INF2Q27J81 1249 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 ZFPM1Q8IX07 1006 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 FAM177A1Q8N128 213 aaPredicted RBP30.11■■■□□ 2.41
KCNC4-207ENST00000489935 DPF2Q92785 391 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 PIGSQ96S52 555 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 IMPACTQ9P2X3 320 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 SWAP70Q9UH65 585 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 RGPD3A6NKT7 1758 aaPredicted RBP30.11■■■□□ 2.41
KCNC4-207ENST00000489935 RGPD4Q7Z3J3 1758 aa30.11■■■□□ 2.41
KCNC4-207ENST00000489935 NEMFO60524 1076 aa30.1■■■□□ 2.41
KCNC4-207ENST00000489935 TPM2P07951 284 aa30.1■■■□□ 2.41
KCNC4-207ENST00000489935 NAPAP54920 295 aa30.1■■■□□ 2.41
KCNC4-207ENST00000489935 EIF6P56537 245 aaKnown RBP30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms