RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MYCNP04198 464 aaPredicted RBP19.1■□□□□ 0.65
PLOD3-216ENST00000489927 FCER1AP12319 257 aa19.1■□□□□ 0.65
PLOD3-216ENST00000489927 UBE3CQ15386 1083 aa19.1■□□□□ 0.65
PLOD3-216ENST00000489927 SLC39A5Q6ZMH5 540 aa19.1■□□□□ 0.65
PLOD3-216ENST00000489927 FBXO28Q9NVF7 368 aa19.1■□□□□ 0.65
PLOD3-216ENST00000489927 ADAMTS5Q9UNA0 930 aa19.1■□□□□ 0.65
PLOD3-216ENST00000489927 SLC4A4Q9Y6R1 1079 aa19.1■□□□□ 0.65
PLOD3-216ENST00000489927 POTEB2H3BUK9 544 aa19.09■□□□□ 0.65
PLOD3-216ENST00000489927 SLC25A27O95847 323 aa19.09■□□□□ 0.65
PLOD3-216ENST00000489927 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
PLOD3-216ENST00000489927 CTR9Q6PD62 1173 aa19.09■□□□□ 0.65
PLOD3-216ENST00000489927 DDRGK1Q96HY6 314 aa19.09■□□□□ 0.65
PLOD3-216ENST00000489927 PUS7LQ9H0K6 701 aaKnown RBP19.09■□□□□ 0.65
PLOD3-216ENST00000489927 KANSL2Q9H9L4 492 aa19.09■□□□□ 0.65
PLOD3-216ENST00000489927 PARP14Q460N5 1801 aa19.09■□□□□ 0.65
PLOD3-216ENST00000489927 ADCYAP1R1P41586 468 aa19.08■□□□□ 0.64
PLOD3-216ENST00000489927 SNX17Q15036 470 aa19.08■□□□□ 0.64
PLOD3-216ENST00000489927 LRRC41Q15345 812 aa19.08■□□□□ 0.64
PLOD3-216ENST00000489927 FAM47AQ5JRC9 791 aa19.08■□□□□ 0.64
PLOD3-216ENST00000489927 FERMT2Q96AC1 680 aa19.08■□□□□ 0.64
PLOD3-216ENST00000489927 MMP19Q99542 508 aa19.08■□□□□ 0.64
PLOD3-216ENST00000489927 PRDM5Q9NQX1 630 aaPredicted RBP19.08■□□□□ 0.64
PLOD3-216ENST00000489927 LTBP2Q14767 1821 aa19.08■□□□□ 0.64
PLOD3-216ENST00000489927 VWA5AO00534 786 aa19.07■□□□□ 0.64
PLOD3-216ENST00000489927 PGK2P07205 417 aa19.07■□□□□ 0.64
PLOD3-216ENST00000489927 TRIM60Q495X7 471 aa19.07■□□□□ 0.64
PLOD3-216ENST00000489927 FAM109BQ6ICB4 259 aaPredicted RBP19.07■□□□□ 0.64
PLOD3-216ENST00000489927 RIOX2Q8IUF8 465 aa19.07■□□□□ 0.64
PLOD3-216ENST00000489927 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.07■□□□□ 0.64
PLOD3-216ENST00000489927 CHMP4BQ9H444 224 aaKnown RBP19.07■□□□□ 0.64
PLOD3-216ENST00000489927 GOPCQ9HD26 462 aa19.07■□□□□ 0.64
PLOD3-216ENST00000489927 RAD21O60216 631 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
PLOD3-216ENST00000489927 STAT3P40763 770 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 FAM83BQ5T0W9 1011 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 ZSCAN25Q6NSZ9 544 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 GUCD1Q96NT3 240 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 TINF2Q9BSI4 451 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 LRRCC1Q9C099 1032 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 ZNF214Q9UL59 606 aaPredicted RBP19.06■□□□□ 0.64
PLOD3-216ENST00000489927 PPP1R9AQ9ULJ8 1098 aa19.06■□□□□ 0.64
PLOD3-216ENST00000489927 COL11A1P12107 1806 aaPredicted RBP19.05■□□□□ 0.64
PLOD3-216ENST00000489927 KCTD2Q14681 263 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 ZNF792Q3KQV3 632 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 REPS2Q8NFH8 660 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 BADQ92934 168 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 FAM161BQ96MY7 647 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 XPNPEP3Q9NQH7 507 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 ARPP21Q9UBL0 812 aaPredicted RBP19.05■□□□□ 0.64
PLOD3-216ENST00000489927 NRBP1Q9UHY1 535 aa19.05■□□□□ 0.64
PLOD3-216ENST00000489927 RARBP10826 455 aa19.04■□□□□ 0.64
PLOD3-216ENST00000489927 TAL1P17542 331 aaPredicted RBP19.04■□□□□ 0.64
PLOD3-216ENST00000489927 SHHQ15465 462 aa19.04■□□□□ 0.64
PLOD3-216ENST00000489927 C9orf50Q5SZB4 431 aa19.04■□□□□ 0.64
PLOD3-216ENST00000489927 C1orf53Q5VUE5 145 aa19.04■□□□□ 0.64
PLOD3-216ENST00000489927 SH3RF1Q7Z6J0 888 aa19.04■□□□□ 0.64
PLOD3-216ENST00000489927 STRBPQ96SI9 672 aaKnown RBP19.04■□□□□ 0.64
PLOD3-216ENST00000489927 NUP88Q99567 741 aaPredicted RBP19.04■□□□□ 0.64
PLOD3-216ENST00000489927 PHF24Q9UPV7 400 aa19.04■□□□□ 0.64
PLOD3-216ENST00000489927 DIS3Q9Y2L1 958 aaKnown RBP19.04■□□□□ 0.64
PLOD3-216ENST00000489927 MYH7P12883 1935 aa19.04■□□□□ 0.64
PLOD3-216ENST00000489927 EYSQ5T1H1 3165 aa19.03■□□□□ 0.64
PLOD3-216ENST00000489927 TRIM43BA6NCK2 446 aa19.03■□□□□ 0.64
PLOD3-216ENST00000489927 C20orf194Q5TEA3 1177 aa19.03■□□□□ 0.64
PLOD3-216ENST00000489927 STK11IPQ8N1F8 1099 aa19.03■□□□□ 0.64
PLOD3-216ENST00000489927 TRIM43Q96BQ3 446 aaPredicted RBP19.03■□□□□ 0.64
PLOD3-216ENST00000489927 ECHDC1Q9NTX5 307 aa19.03■□□□□ 0.64
PLOD3-216ENST00000489927 RCAN3Q9UKA8 241 aa19.03■□□□□ 0.64
PLOD3-216ENST00000489927 GSG1L2A8MUP6 293 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 PGK1P00558 417 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 ZNF865P0CJ78 1059 aaPredicted RBP19.02■□□□□ 0.64
PLOD3-216ENST00000489927 RASA1P20936 1047 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 TLE2Q04725 743 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 SBK1Q52WX2 424 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 RNF180Q86T96 592 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 LENG1Q96BZ8 264 aaPredicted RBP19.02■□□□□ 0.64
PLOD3-216ENST00000489927 SLF1Q9BQI6 1058 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 ROBO3Q96MS0 1386 aa19.02■□□□□ 0.64
PLOD3-216ENST00000489927 GREB1LQ9C091 1923 aaPredicted RBP19.02■□□□□ 0.63
PLOD3-216ENST00000489927 ZNFX1Q9P2E3 1918 aaKnown RBP19.02■□□□□ 0.63
PLOD3-216ENST00000489927 CDH23Q9H251 3354 aa19.01■□□□□ 0.63
PLOD3-216ENST00000489927 COPB2P35606 906 aa19.01■□□□□ 0.63
PLOD3-216ENST00000489927 ZNF697Q5TEC3 545 aa19.01■□□□□ 0.63
PLOD3-216ENST00000489927 TEX13BQ9BXU2 312 aa19.01■□□□□ 0.63
PLOD3-216ENST00000489927 MINDY4BA8MYZ0 360 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 F5H6K3 240 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 AKR1A1P14550 325 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 ITGB8P26012 769 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 KLRC3Q07444 240 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 SNRNP48Q6IEG0 339 aaKnown RBP19■□□□□ 0.63
PLOD3-216ENST00000489927 GIMAP6Q6P9H5 292 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 KBTBD3Q8NAB2 608 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 OSBP2Q969R2 916 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 MKNK2Q9HBH9 465 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 NYAP2Q9P242 653 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 CNPY2Q9Y2B0 182 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 RIPK3Q9Y572 518 aa19■□□□□ 0.63
PLOD3-216ENST00000489927 PLXNA1Q9UIW2 1896 aa18.99■□□□□ 0.63
PLOD3-216ENST00000489927 A0A1W2PQ45 241 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms