RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ATP6V1DQ9Y5K8 247 aa16.4■□□□□ 0.22
VPS26A-205ENST00000489656 ADM5C9JUS6 153 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 F5H6K3 240 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 CYTH3O43739 400 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 KLRC3Q07444 240 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
VPS26A-205ENST00000489656 SLC35G1Q2M3R5 365 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 SLFN13Q68D06 897 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 RASGRP2Q7LDG7 609 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 SCYL3Q8IZE3 742 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
VPS26A-205ENST00000489656 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
VPS26A-205ENST00000489656 RLFQ13129 1914 aa16.39■□□□□ 0.21
VPS26A-205ENST00000489656 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
VPS26A-205ENST00000489656 NDUFB10O96000 172 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 VEGFAP15692 232 aaPredicted RBP16.38■□□□□ 0.21
VPS26A-205ENST00000489656 INPP5BP32019 993 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 RESTQ13127 1097 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
VPS26A-205ENST00000489656 AIFM3Q96NN9 605 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 WRNIP1Q96S55 665 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 MTMR7Q9Y216 660 aa16.38■□□□□ 0.21
VPS26A-205ENST00000489656 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
VPS26A-205ENST00000489656 GOLGA8HP0CJ92 632 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 SCG2P13521 617 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 XBP1P17861 261 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 ECE1P42892 770 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 SLC1A4P43007 532 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 TRIM29Q14134 588 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 EAPPQ56P03 285 aaPredicted RBP16.37■□□□□ 0.21
VPS26A-205ENST00000489656 KRT40Q6A162 431 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 ACER1Q8TDN7 264 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 CDCA5Q96FF9 252 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 VCPKMTQ9H867 229 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 SH3GLB2Q9NR46 395 aa16.37■□□□□ 0.21
VPS26A-205ENST00000489656 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-205ENST00000489656 hCG_1984214I3L0E3 225 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 PPP1R12BO60237 982 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-205ENST00000489656 NF2P35240 595 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 MAP3K11Q16584 847 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-205ENST00000489656 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 ZNF713Q8N859 430 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-205ENST00000489656 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-205ENST00000489656 MTMR8Q96EF0 704 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 KIAA1683Q9H0B3 1180 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 AS3MTQ9HBK9 375 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-205ENST00000489656 SMCHD1A6NHR9 2005 aa16.36■□□□□ 0.21
VPS26A-205ENST00000489656 PLA2G6O60733 806 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 MMP1P03956 469 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 BMP3P12645 472 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 MCM4P33991 863 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 MAP3K9P80192 1104 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 LPAR1Q92633 364 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 RRP36Q96EU6 259 aaKnown RBP16.35■□□□□ 0.21
VPS26A-205ENST00000489656 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 PICK1Q9NRD5 415 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 GJB4Q9NTQ9 266 aa16.35■□□□□ 0.21
VPS26A-205ENST00000489656 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.35■□□□□ 0.21
VPS26A-205ENST00000489656 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
VPS26A-205ENST00000489656 PTPRAP18433 802 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 U2AF2P26368 475 aaKnown RBP eCLIP16.34■□□□□ 0.21
VPS26A-205ENST00000489656 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
VPS26A-205ENST00000489656 FOSBP53539 338 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
VPS26A-205ENST00000489656 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 LDHDQ86WU2 507 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 ZKSCAN4Q969J2 545 aaPredicted RBP16.34■□□□□ 0.21
VPS26A-205ENST00000489656 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 GLIS2Q9BZE0 524 aaPredicted RBP16.34■□□□□ 0.21
VPS26A-205ENST00000489656 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 JMJD4Q9H9V9 463 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 RRAGCQ9HB90 399 aa16.34■□□□□ 0.21
VPS26A-205ENST00000489656 hCG_1642624A0A1W2PR95 340 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 USP14P54578 494 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.2
VPS26A-205ENST00000489656 KIAA1755Q5JYT7 1200 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 ATL3Q6DD88 541 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 TTBK2Q6IQ55 1244 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 POTEHQ6S545 545 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 DLK2Q6UY11 383 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.33■□□□□ 0.2
VPS26A-205ENST00000489656 ADGRF4Q8IZF3 695 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms