RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 PRDM1O75626 825 aa19.08■□□□□ 0.64
ERGIC3-217ENST00000488935 TDHQ8IZJ6 230 aa19.08■□□□□ 0.64
ERGIC3-217ENST00000488935 OTUD7AQ8TE49 926 aaPredicted RBP19.08■□□□□ 0.64
ERGIC3-217ENST00000488935 FERMT2Q96AC1 680 aa19.08■□□□□ 0.64
ERGIC3-217ENST00000488935 DDRGK1Q96HY6 314 aa19.08■□□□□ 0.64
ERGIC3-217ENST00000488935 ATP11BQ9Y2G3 1177 aa19.08■□□□□ 0.64
ERGIC3-217ENST00000488935 WDR46O15213 610 aaKnown RBP19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 STRNO43815 780 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 TAL1P17542 331 aaPredicted RBP19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 RASA1P20936 1047 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 RTP1P59025 263 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 OLFML2BQ68BL8 750 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 ZSCAN25Q6NSZ9 544 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 SHCBP1Q8NEM2 672 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 LENG1Q96BZ8 264 aaPredicted RBP19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 MAML3Q96JK9 1138 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 SEC62Q99442 399 aaKnown RBP19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 CHMP4BQ9H444 224 aaKnown RBP19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 DCTPP1Q9H773 170 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 KANSL2Q9H9L4 492 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 EPB41L4AQ9HCS5 686 aaPredicted RBP19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 PLXNA1Q9UIW2 1896 aa19.07■□□□□ 0.64
ERGIC3-217ENST00000488935 DEFB123Q8N688 67 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 MB21D1Q8N884 522 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 KBTBD3Q8NAB2 608 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 MMP19Q99542 508 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 MROH8Q9H579 483 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 SH2D4AQ9H788 454 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 MKNK2Q9HBH9 465 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 ZNF236Q9UL36 1845 aa19.06■□□□□ 0.64
ERGIC3-217ENST00000488935 DNM1LO00429 736 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 VWA5AO00534 786 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 RNF113AO15541 343 aaKnown RBP19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 APPP05067 770 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 FCER1AP12319 257 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 ADCYAP1R1P41586 468 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 FAM47AQ5JRC9 791 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 PPP1R9AQ9ULJ8 1098 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 MYH4Q9Y623 1939 aa19.05■□□□□ 0.64
ERGIC3-217ENST00000488935 GREB1LQ9C091 1923 aaPredicted RBP19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 SEPT4O43236 478 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 GPAA1O43292 621 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 STAT3P40763 770 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 REPS2Q8NFH8 660 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 APPBP2Q92624 585 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 GOPCQ9HD26 462 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 PRDM5Q9NQX1 630 aaPredicted RBP19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 ARPP21Q9UBL0 812 aaPredicted RBP19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 CLIP2Q9UDT6 1046 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 ADAMTS5Q9UNA0 930 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
ERGIC3-217ENST00000488935 MSCO60682 206 aa19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 LRRC41Q15345 812 aa19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 TRIM60Q495X7 471 aa19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 SLC39A5Q6ZMH5 540 aa19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 SH3RF1Q7Z6J0 888 aa19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 RIOX2Q8IUF8 465 aa19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 SLC17A8Q8NDX2 589 aa19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 ZNF214Q9UL59 606 aaPredicted RBP19.03■□□□□ 0.64
ERGIC3-217ENST00000488935 KBTBD13C9JR72 458 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 F5H6K3 240 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 NDUFB10O96000 172 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 PGK1P00558 417 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 TDO2P48775 406 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 KLRC3Q07444 240 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 LRIT3Q3SXY7 679 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 SBK1Q52WX2 424 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 CPXCR1Q8N123 301 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 LRRC47Q8N1G4 583 aaKnown RBP19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 ARRDC4Q8NCT1 418 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 FAM161BQ96MY7 647 aa19.02■□□□□ 0.64
ERGIC3-217ENST00000488935 SLC25A27O95847 323 aa19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 IRX5P78411 483 aaPredicted RBP19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 ZNF792Q3KQV3 632 aa19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 ABRAQ8N0Z2 381 aa19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 LBHD1Q9BQE6 289 aaPredicted RBP19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 SLF1Q9BQI6 1058 aa19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 SLC5A4Q9NY91 659 aa19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 MCM3APO60318 1980 aa19.01■□□□□ 0.63
ERGIC3-217ENST00000488935 LAMA2P24043 3122 aaKnown RBP19■□□□□ 0.63
ERGIC3-217ENST00000488935 KCTD2Q14681 263 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 SNRNP48Q6IEG0 339 aaKnown RBP19■□□□□ 0.63
ERGIC3-217ENST00000488935 CCDC129Q6ZRS4 1044 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 IFNL3Q8IZI9 196 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 KIFC2Q96AC6 838 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 CEP95Q96GE4 821 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 GPATCH3Q96I76 525 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 TINF2Q9BSI4 451 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 RAVER2Q9HCJ3 691 aaKnown RBP19■□□□□ 0.63
ERGIC3-217ENST00000488935 LTBP2Q14767 1821 aa19■□□□□ 0.63
ERGIC3-217ENST00000488935 C9orf50Q5SZB4 431 aa18.99■□□□□ 0.63
ERGIC3-217ENST00000488935 ZNF444Q8N0Y2 327 aaPredicted RBP18.99■□□□□ 0.63
ERGIC3-217ENST00000488935 PI4K2BQ8TCG2 481 aa18.99■□□□□ 0.63
ERGIC3-217ENST00000488935 BADQ92934 168 aa18.99■□□□□ 0.63
ERGIC3-217ENST00000488935 XPNPEP3Q9NQH7 507 aa18.99■□□□□ 0.63
ERGIC3-217ENST00000488935 MTMR10Q9NXD2 777 aa18.99■□□□□ 0.63
ERGIC3-217ENST00000488935 NYAP2Q9P242 653 aa18.99■□□□□ 0.63
ERGIC3-217ENST00000488935 PRKAG2Q9UGJ0 569 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms