RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SRGNP10124 158 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 NPR1P16066 1061 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 PTPRAP18433 802 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 KCNA3P22001 575 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 CHRNA5P30532 468 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 AIMP1Q12904 312 aaKnown RBP6.53□□□□□ -1.36
SF3A3-207ENST00000488934 ZNF211Q13398 564 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-207ENST00000488934 ADGRE1Q14246 886 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
SF3A3-207ENST00000488934 HLFQ16534 295 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 KRT24Q2M2I5 525 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 TWISTNBQ3B726 338 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-207ENST00000488934 IGF2-ASQ6U949 168 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 TTLL7Q6ZT98 887 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 COPS6Q7L5N1 327 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 LRP10Q7Z4F1 713 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 TXNRD3Q86VQ6 643 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 RETREG2Q8NC44 543 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 PLBD2Q8NHP8 589 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 SNX29Q8TEQ0 813 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 ZNF622Q969S3 477 aaKnown RBP eCLIP6.53□□□□□ -1.361e-15■□□□□ 11.1
SF3A3-207ENST00000488934 UTP14AQ9BVJ6 771 aaKnown RBP6.53□□□□□ -1.36
SF3A3-207ENST00000488934 TMX4Q9H1E5 349 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-207ENST00000488934 TMEM63CQ9P1W3 806 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 POLIQ9UNA4 740 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 FANCIQ9NVI1 1328 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 CCDC88AQ3V6T2 1871 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 CARNS1A5YM72 827 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 ICMTO60725 284 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 PHACTR2O75167 634 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 SELPP16109 830 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 GPTP24298 496 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 ALDH1B1P30837 517 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 TCIRG1Q13488 830 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 MBTPS1Q14703 1052 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 DIEXFQ68CQ4 756 aaKnown RBP6.52□□□□□ -1.37
SF3A3-207ENST00000488934 ARHGAP27Q6ZUM4 889 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 ZNF34Q8IZ26 560 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 RPGRQ92834 1020 aaKnown RBP6.52□□□□□ -1.37
SF3A3-207ENST00000488934 TSR2Q969E8 191 aaKnown RBP6.52□□□□□ -1.37
SF3A3-207ENST00000488934 WWC3Q9ULE0 1092 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 PPME1Q9Y570 386 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 TIAM2Q8IVF5 1701 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 ADCY9O60503 1353 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 MYH3P11055 1940 aa6.52□□□□□ -1.37
SF3A3-207ENST00000488934 TNRC6CQ9HCJ0 1690 aaKnown RBP6.52□□□□□ -1.37
SF3A3-207ENST00000488934 UBN2Q6ZU65 1347 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 SH3TC1Q8TE82 1336 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 SLX4Q8IY92 1834 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 KLRG2A4D1S0 409 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-207ENST00000488934 E9PSI1 815 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 H3BRB1 525 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 ELL2O00472 640 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-207ENST00000488934 NTSR2O95665 410 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 ANXA1P04083 346 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 NEFLP07196 543 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 FURINP09958 794 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 CDC27P30260 824 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 NEXNQ0ZGT2 675 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 DOC2BQ14184 412 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 PROSER3Q2NL68 480 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 CRY2Q49AN0 593 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 PRPF40BQ6NWY9 871 aaKnown RBP6.51□□□□□ -1.37
SF3A3-207ENST00000488934 C8orf58Q8NAV2 365 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 MRPL18Q9H0U6 180 aaKnown RBP6.51□□□□□ -1.37
SF3A3-207ENST00000488934 TUT1Q9H6E5 874 aaKnown RBP6.51□□□□□ -1.37
SF3A3-207ENST00000488934 KANSL3Q9P2N6 904 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 BRPF3Q9ULD4 1205 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
SF3A3-207ENST00000488934 LTBP3Q9NS15 1303 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 DDX60Q8IY21 1712 aaKnown RBP6.5□□□□□ -1.37
SF3A3-207ENST00000488934 ABCC12Q96J65 1359 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 NDUFB5O43674 189 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 EDN3P14138 238 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 LMNB1P20700 586 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 ATP11AP98196 1134 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 CCDC93Q567U6 631 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 COL13A1Q5TAT6 717 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-207ENST00000488934 SUSD4Q5VX71 490 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 SHISA2Q6UWI4 295 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 NLRP10Q86W26 655 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 RTKN2Q8IZC4 609 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 CEP120Q8N960 986 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 CCDC191Q8NCU4 936 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 ZNF428Q96B54 188 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 RBM17Q96I25 401 aaKnown RBP6.5□□□□□ -1.37
SF3A3-207ENST00000488934 LACRTQ9GZZ8 138 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 TAOK3Q9H2K8 898 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 RASSF4Q9H2L5 321 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 ANO2Q9NQ90 1003 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 TRMT112Q9UI30 125 aaKnown RBP6.5□□□□□ -1.37
SF3A3-207ENST00000488934 KDM2BQ8NHM5 1336 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 ZNF521Q96K83 1311 aa6.5□□□□□ -1.37
SF3A3-207ENST00000488934 FZD6O60353 706 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-207ENST00000488934 HOXA10P31260 410 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-207ENST00000488934 SLC10A5Q5PT55 438 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 KSR2Q6VAB6 950 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms