RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 ANXA1P04083 346 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 ERCC3P19447 782 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 EIF2S2P20042 333 aaKnown RBP8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 ALDH1B1P30837 517 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 IARSP41252 1262 aaKnown RBP8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 FMR1Q06787 632 aaKnown RBP eCLIP8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 LDHDQ86WU2 507 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 RTKN2Q8IZC4 609 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 CEP120Q8N960 986 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 PNISRQ8TF01 805 aaKnown RBP8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 RPGRQ92834 1020 aaKnown RBP8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 CSRNP1Q96S65 589 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 LPIN3Q9BQK8 851 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 NYXQ9GZU5 481 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 SMG9Q9H0W8 520 aaKnown RBP8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 JPH1Q9HDC5 661 aaPredicted RBP8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 HACL1Q9UJ83 578 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 MKL2Q9ULH7 1088 aa8.29□□□□□ -1.08
TNFSF4-203ENST00000488053 COL4A5P29400 1685 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 ANKRD33BA6NCL7 494 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 ERVV-1B6SEH8 477 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 EPHX2P34913 555 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 COL19A1Q14993 1142 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 SUSD4Q5VX71 490 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 MAP1SQ66K74 1059 aaPredicted RBP8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 BEND7Q8N7W2 519 aaPredicted RBP8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 NUDT8Q8WV74 236 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 SCARF2Q96GP6 870 aaPredicted RBP8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 TSPYL4Q9UJ04 414 aa8.28□□□□□ -1.08
TNFSF4-203ENST00000488053 LTBP1Q14766 1721 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 FZD9O00144 591 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 PROSER3Q2NL68 480 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 CRY2Q49AN0 593 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 GALNT12Q8IXK2 581 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 LAMB2P55268 1798 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 PASKQ96RG2 1323 aa8.27□□□□□ -1.09
TNFSF4-203ENST00000488053 TAF1P21675 1872 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 CNTNAP1P78357 1384 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 ANKRD36CQ5JPF3 1778 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 ADAMTSL1Q8N6G6 1762 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 GNB5O14775 395 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 NTSR2O95665 410 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 EIF6P56537 245 aaKnown RBP8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 RIPK4P57078 832 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 SNRPNP63162 240 aaKnown RBP8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 ENOX2Q16206 610 aaKnown RBP8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 CCDC146Q8IYE0 955 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 ZNF34Q8IZ26 560 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 CACTIN-AS1Q8N1I8 211 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 RBM17Q96I25 401 aaKnown RBP8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 PSMD1Q99460 953 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 SNED1Q8TER0 1413 aa8.26□□□□□ -1.09
TNFSF4-203ENST00000488053 PNMA6FA0A0J9YX94 578 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 FOXN1O15353 648 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 POLR3DP05423 398 aaPredicted RBP8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 MAPK8P45983 427 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 AFF1P51825 1210 aaKnown RBP8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 ATP11AP98196 1134 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 ATP2B2Q01814 1243 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 AIMP1Q12904 312 aaKnown RBP8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 KRT24Q2M2I5 525 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 LINC00114Q6XXX2 140 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 CNTROBQ8N137 903 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 GPC2Q8N158 579 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 RASSF4Q9H2L5 321 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 PNNQ9H307 717 aaKnown RBP8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 DZANK1Q9NVP4 752 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 RIC1Q4ADV7 1423 aa8.25□□□□□ -1.09
TNFSF4-203ENST00000488053 IBTKQ9P2D0 1353 aaPredicted RBP8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 RNF225M0QZC1 329 aaPredicted RBP8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 PPIP5K2O43314 1243 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 HOXA10P31260 410 aaPredicted RBP8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 TMPOP42166 694 aaKnown RBP8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 EPS15P42566 896 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 AOC3Q16853 763 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 PPP1R42Q7Z4L9 355 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 PNMA8AQ86V59 439 aaPredicted RBP8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 NIM1KQ8IY84 436 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 XAGE3Q8WTP9 111 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 CCDC74AQ96AQ1 378 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 CRAMP1Q96RY5 1269 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 OSMRQ99650 979 aa8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 UTP14AQ9BVJ6 771 aaKnown RBP8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 LAS1LQ9Y4W2 734 aaKnown RBP8.24□□□□□ -1.09
TNFSF4-203ENST00000488053 SPDYE3A6NKU9 549 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 P4HBP07237 508 aaKnown RBP8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 HCLS1P14317 486 aaPredicted RBP8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 MFAP1P55081 439 aaKnown RBP8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 FGD1P98174 961 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 GRM1Q13255 1194 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms