RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 FAM207AQ9NSI2 230 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 KRT13P13646 458 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ARMC2Q8NEN0 867 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 IP6K1Q92551 441 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SAAL1Q96ER3 474 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ANKZF1Q9H8Y5 726 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZFYVE16Q7Z3T8 1539 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CCNI2Q6ZMN8 369 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RWDD2AQ9UIY3 292 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RAD21O60216 631 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 IRX1P78414 480 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SF3A3Q12874 501 aaKnown RBP eCLIP16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NCAPHQ15003 741 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TEX11Q8IYF3 940 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 KCNK9Q9NPC2 374 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 HDAC6Q9UBN7 1215 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 EXOC5O00471 708 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RAPGEF1Q13905 1077 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 GLE1Q53GS7 698 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CNNM4Q6P4Q7 775 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 LRRC59Q96AG4 307 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 LRRIQ3A6PVS8 624 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ACTN4O43707 911 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NR1I3Q14994 352 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NLRP14Q86W24 1093 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CCHCR1Q8TD31 782 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NUCKS1Q9H1E3 243 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TAF6LQ9Y6J9 622 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 A0A1W2PRG0 241 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CCDC38Q502W7 563 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PIK3AP1Q6ZUJ8 805 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TAOK1Q7L7X3 1001 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PPFIBP2Q8ND30 876 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CCDC77Q9BR77 488 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 STRN4Q9NRL3 753 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 IQSEC3Q9UPP2 1182 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MED23Q9ULK4 1368 aa16.94■□□□□ 0.3
HLA-DQB1-209ENST00000487676 COBLO75128 1261 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RPN1P04843 607 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZBED6P86452 979 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SWT1Q5T5J6 900 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 KRT12Q99456 494 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZAP70P43403 619 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 C6orf163Q5TEZ5 329 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MSL3Q8N5Y2 521 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MMS19Q96T76 1030 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NAP1L3Q99457 506 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZC3H6P61129 1189 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 EXOSC10Q01780 885 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 BIRC2Q13490 618 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 VWA3BQ502W6 1294 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TUBGCP2Q9BSJ2 902 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 VPS54Q9P1Q0 977 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 STK38LQ9Y2H1 464 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CRB1P82279 1406 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MYOM1P52179 1685 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PPP1R37O75864 691 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ANKRD13CQ8N6S4 541 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NHEJ1Q9H9Q4 299 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MBD4O95243 580 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ALDH3A1P30838 453 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 STOX1Q6ZVD7 989 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TRIM31Q9BZY9 425 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 BUB1O43683 1085 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ATP1A1P05023 1023 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ATP5DP30049 168 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TCP11X2Q5H9J9 407 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RUBCNQ92622 972 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 P3H4Q92791 437 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 EPN3Q9H201 632 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 LRRD1A4D1F6 860 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TSPY2A6NKD2 308 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MMP1P03956 469 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 GCFC2P16383 781 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CXCR5P32302 372 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CYP27A1Q02318 531 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZNF594Q96JF6 807 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PPP1R12CQ9BZL4 782 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NFU1Q9UMS0 254 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ANKRD62A6NC57 917 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MYO1FO00160 1098 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RGS16O15492 202 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MXRA7P84157 204 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 VSIG1Q86XK7 387 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RNF10Q8N5U6 811 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms