RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 PLA2G6O60733 806 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 SNHG28P0DPA3 235 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 SLC1A4P43007 532 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 FGD1P98174 961 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 COG2Q14746 738 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 NFXL1Q6ZNB6 911 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 Q6ZUG5 572 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 MAP3K14Q99558 947 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 KIF2CQ99661 725 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 CFHR5Q9BXR6 569 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 LRRC2Q9BYS8 371 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 ASCC2Q9H1I8 757 aaPredicted RBP15.58■□□□□ 0.08
COL4A6-207ENST00000487645 SENP2Q9HC62 589 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 GPHNQ9NQX3 736 aaPredicted RBP15.58■□□□□ 0.08
COL4A6-207ENST00000487645 PDRG1Q9NUG6 133 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 WBP1LQ9NX94 342 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 SAGE1Q9NXZ1 904 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 HOXC10Q9NYD6 342 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 CALM1P0DP23 149 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 CALM2P0DP24 149 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 CALM3P0DP25 149 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 PDHBP11177 359 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
COL4A6-207ENST00000487645 FAM83BQ5T0W9 1011 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 GPATCH4Q5T3I0 446 aaKnown RBP15.57■□□□□ 0.08
COL4A6-207ENST00000487645 SYNE3Q6ZMZ3 975 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 CHURC1Q8WUH1 139 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 TCEANC2Q96MN5 208 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 PARK7Q99497 189 aaKnown RBP15.57■□□□□ 0.08
COL4A6-207ENST00000487645 BEGAINQ9BUH8 593 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 UPF3BQ9BZI7 483 aaKnown RBP15.57■□□□□ 0.08
COL4A6-207ENST00000487645 TANGO6Q9C0B7 1094 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 ZFYVE28Q9HCC9 887 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 RNF186Q9NXI6 227 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 FEM1BQ9UK73 627 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 MYPNQ86TC9 1320 aa15.57■□□□□ 0.08
COL4A6-207ENST00000487645 DDAH1O94760 285 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 EVCP57679 992 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 ZNF543Q08ER8 600 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 TROAPQ12815 778 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 TAF1CQ15572 869 aaPredicted RBP15.56■□□□□ 0.08
COL4A6-207ENST00000487645 ASPRV1Q53RT3 343 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 LBX2Q6XYB7 198 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 FAM160B2Q86V87 743 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 ZNF654Q8IZM8 581 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 PRPF38AQ8NAV1 312 aaKnown RBP15.56■□□□□ 0.08
COL4A6-207ENST00000487645 GTF3C2Q8WUA4 911 aaPredicted RBP15.56■□□□□ 0.08
COL4A6-207ENST00000487645 NUP88Q99567 741 aaPredicted RBP15.56■□□□□ 0.08
COL4A6-207ENST00000487645 SLC12A7Q9Y666 1083 aa15.56■□□□□ 0.08
COL4A6-207ENST00000487645 COL11A1P12107 1806 aaPredicted RBP15.55■□□□□ 0.08
COL4A6-207ENST00000487645 TLR2O60603 784 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 TRPA1O75762 1119 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 FLOT1O75955 427 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 DSG3P32926 999 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 GCLCP48506 637 aaPredicted RBP15.55■□□□□ 0.08
COL4A6-207ENST00000487645 NEK4P51957 841 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 RCAN1P53805 252 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 ANKRD1Q15327 319 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 BTNL9Q6UXG8 535 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 BRF1Q92994 677 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
COL4A6-207ENST00000487645 ADAMTS5Q9UNA0 930 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 MTMR7Q9Y216 660 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 MYH6P13533 1939 aa15.55■□□□□ 0.08
COL4A6-207ENST00000487645 PALM3A6NDB9 673 aaPredicted RBP15.54■□□□□ 0.08
COL4A6-207ENST00000487645 TMEM232C9JQI7 657 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 PARP1P09874 1014 aaKnown RBP15.54■□□□□ 0.08
COL4A6-207ENST00000487645 FDX1P10109 184 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 CYP2C8P10632 490 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 STAT2P52630 851 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 HERVK_113P62684 666 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 CRHR2Q13324 411 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 TOB2Q14106 344 aaPredicted RBP15.54■□□□□ 0.08
COL4A6-207ENST00000487645 GRM4Q14833 912 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 PPP2R5BQ15173 497 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 RABEP1Q15276 862 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 CCDC96Q2M329 555 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 APOA5Q6Q788 366 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 KCTD1Q719H9 257 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 BRPF3Q9ULD4 1205 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 PPP1R9AQ9ULJ8 1098 aa15.54■□□□□ 0.08
COL4A6-207ENST00000487645 BAZ2BQ9UIF8 2168 aaKnown RBP15.53■□□□□ 0.08
COL4A6-207ENST00000487645 KLF18A0A0U1RQI7 1052 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 ZBTB43O43298 467 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 KIF5BP33176 963 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 APOBRQ0VD83 1088 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 NOM1Q5C9Z4 860 aaKnown RBP15.53■□□□□ 0.08
COL4A6-207ENST00000487645 MB21D1Q8N884 522 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 FANCBQ8NB91 859 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 CTCFLQ8NI51 663 aaPredicted RBP15.53■□□□□ 0.08
COL4A6-207ENST00000487645 SMCR8Q8TEV9 937 aaPredicted RBP15.53■□□□□ 0.08
COL4A6-207ENST00000487645 ZNF274Q96GC6 653 aaPredicted RBP15.53■□□□□ 0.08
COL4A6-207ENST00000487645 SLF1Q9BQI6 1058 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 GPCPD1Q9NPB8 672 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 FBXO28Q9NVF7 368 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 MAD2L2Q9UI95 211 aa15.53■□□□□ 0.08
COL4A6-207ENST00000487645 FRMPD2Q68DX3 1309 aaPredicted RBP15.52■□□□□ 0.08
COL4A6-207ENST00000487645 ADGRA2Q96PE1 1338 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 SPDYE16A6NNV3 312 aaPredicted RBP15.52■□□□□ 0.08
COL4A6-207ENST00000487645 KLRF2D3W0D1 207 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms