RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TMEM265A0A087WTH1 108 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 A0A1W2PQ45 241 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-228ENST00000487354 A0A1W2PQY0 241 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 PGK1P00558 417 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 CLTBP09497 229 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 PLS1Q14651 629 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 CRNKL1Q9BZJ0 848 aaKnown RBP18.62■□□□□ 0.57
MCF2L-228ENST00000487354 VCPKMTQ9H867 229 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 XPNPEP3Q9NQH7 507 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 NRBP1Q9UHY1 535 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 ZNF532Q9HCE3 1301 aa18.62■□□□□ 0.57
MCF2L-228ENST00000487354 ADAMTS4O75173 837 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 PGK2P07205 417 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 ZNF865P0CJ78 1059 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-228ENST00000487354 ICA1Q05084 483 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 ZNF792Q3KQV3 632 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 SLFNL1Q499Z3 407 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 SLC9C2Q5TAH2 1124 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 REPS2Q8NFH8 660 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 RNPC3Q96LT9 517 aaKnown RBP18.61■□□□□ 0.57
MCF2L-228ENST00000487354 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
MCF2L-228ENST00000487354 REV3LO60673 3130 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 WDR46O15213 610 aaKnown RBP18.6■□□□□ 0.57
MCF2L-228ENST00000487354 PRKAB2O43741 272 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 FCER1AP12319 257 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 GRIN2CQ14957 1233 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 TINF2Q9BSI4 451 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 SLC5A4Q9NY91 659 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 TACC3Q9Y6A5 838 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 CHD7Q9P2D1 2997 aa18.6■□□□□ 0.57
MCF2L-228ENST00000487354 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
MCF2L-228ENST00000487354 RARBP10826 455 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 FAAP100Q0VG06 881 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 RIOX2Q8IUF8 465 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 IL1RAPL2Q9NP60 686 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 SWAP70Q9UH65 585 aa18.59■□□□□ 0.57
MCF2L-228ENST00000487354 ZNF214Q9UL59 606 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-228ENST00000487354 SLC25A27O95847 323 aa18.58■□□□□ 0.56
MCF2L-228ENST00000487354 CHGBP05060 677 aa18.58■□□□□ 0.56
MCF2L-228ENST00000487354 TTF1Q15361 905 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-228ENST00000487354 CCSAPQ6IQ19 270 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-228ENST00000487354 ANKRD33Q7Z3H0 272 aa18.58■□□□□ 0.56
MCF2L-228ENST00000487354 MMP19Q99542 508 aa18.58■□□□□ 0.56
MCF2L-228ENST00000487354 ARHGEF10LQ9HCE6 1279 aa18.58■□□□□ 0.56
MCF2L-228ENST00000487354 DIS3Q9Y2L1 958 aaKnown RBP18.58■□□□□ 0.56
MCF2L-228ENST00000487354 MYH4Q9Y623 1939 aa18.58■□□□□ 0.56
MCF2L-228ENST00000487354 LRRC37A2A6NM11 1700 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 SYNRGQ9UMZ2 1314 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 GOLIM4O00461 696 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 DNAJB2P25686 324 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 FPGSQ05932 587 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 RNF180Q86T96 592 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.57■□□□□ 0.56
MCF2L-228ENST00000487354 TBX21Q9UL17 535 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 MYO9BQ13459 2157 aa18.57■□□□□ 0.56
MCF2L-228ENST00000487354 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 MYADML2A6NDP7 307 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 VWA5AO00534 786 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 ADCY6O43306 1168 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 EEF2P13639 858 aaKnown RBP18.56■□□□□ 0.56
MCF2L-228ENST00000487354 AKR1A1P14550 325 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 RAG1P15918 1043 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 CDK8P49336 464 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 IRX5P78411 483 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-228ENST00000487354 C12orf60Q5U649 245 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-228ENST00000487354 ERC1Q8IUD2 1116 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 KLHDC9Q8NEP7 349 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 TOX2Q96NM4 488 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.56■□□□□ 0.56
MCF2L-228ENST00000487354 PPP1R9AQ9ULJ8 1098 aa18.56■□□□□ 0.56
MCF2L-228ENST00000487354 MBD4O95243 580 aa18.55■□□□□ 0.56
MCF2L-228ENST00000487354 ACLYP53396 1101 aa18.55■□□□□ 0.56
MCF2L-228ENST00000487354 RASIP1Q5U651 963 aa18.55■□□□□ 0.56
MCF2L-228ENST00000487354 C16orf86Q6ZW13 317 aa18.55■□□□□ 0.56
MCF2L-228ENST00000487354 C16orf59Q7L2K0 433 aa18.55■□□□□ 0.56
MCF2L-228ENST00000487354 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
MCF2L-228ENST00000487354 DNAJC2Q99543 621 aaKnown RBP18.55■□□□□ 0.56
MCF2L-228ENST00000487354 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.55■□□□□ 0.566e-9■■□□□ 12.7
MCF2L-228ENST00000487354 SH2D4AQ9H788 454 aa18.55■□□□□ 0.56
MCF2L-228ENST00000487354 TMEM39AQ9NV64 488 aa18.55■□□□□ 0.56
MCF2L-228ENST00000487354 SNAI1O95863 264 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-228ENST00000487354 ADD2P35612 726 aa18.54■□□□□ 0.56
MCF2L-228ENST00000487354 STAT3P40763 770 aa18.54■□□□□ 0.56
MCF2L-228ENST00000487354 TSEN34Q9BSV6 310 aaKnown RBP18.54■□□□□ 0.56
MCF2L-228ENST00000487354 DNAJC25-GNG10A0A024R161 153 aa18.53■□□□□ 0.56
MCF2L-228ENST00000487354 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-228ENST00000487354 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-228ENST00000487354 PBX2P40425 430 aa18.53■□□□□ 0.56
MCF2L-228ENST00000487354 KCTD2Q14681 263 aa18.53■□□□□ 0.56
MCF2L-228ENST00000487354 TJAP1Q5JTD0 557 aa18.53■□□□□ 0.56
MCF2L-228ENST00000487354 FAM83BQ5T0W9 1011 aa18.53■□□□□ 0.56
MCF2L-228ENST00000487354 SYMPKQ92797 1274 aaKnown RBP18.53■□□□□ 0.56
MCF2L-228ENST00000487354 CCDC17Q96LX7 622 aa18.53■□□□□ 0.56
MCF2L-228ENST00000487354 FGD4Q96M96 766 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms