RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 FLAD1Q8NFF5 587 aa25.91■■□□□ 1.74
LRRC1-203ENST00000487251 NEDD1Q8NHV4 660 aa25.91■■□□□ 1.74
LRRC1-203ENST00000487251 SCN9AQ15858 1988 aa25.91■■□□□ 1.74
LRRC1-203ENST00000487251 ZNF579Q8NAF0 562 aaKnown RBP25.9■■□□□ 1.74
LRRC1-203ENST00000487251 KIAA1524Q8TCG1 905 aa25.9■■□□□ 1.74
LRRC1-203ENST00000487251 BPIFA3Q9BQP9 254 aa25.9■■□□□ 1.74
LRRC1-203ENST00000487251 G3V3G9 751 aa25.9■■□□□ 1.74
LRRC1-203ENST00000487251 DCAF8Q5TAQ9 597 aa25.9■■□□□ 1.74
LRRC1-203ENST00000487251 ZNF287Q9HBT7 754 aa25.9■■□□□ 1.74
LRRC1-203ENST00000487251 PALM3A6NDB9 673 aaPredicted RBP25.89■■□□□ 1.74
LRRC1-203ENST00000487251 BMP6P22004 513 aa25.89■■□□□ 1.74
LRRC1-203ENST00000487251 PTGDRQ13258 359 aa25.89■■□□□ 1.74
LRRC1-203ENST00000487251 CCDC178Q5BJE1 867 aa25.89■■□□□ 1.74
LRRC1-203ENST00000487251 WWC2Q6AWC2 1192 aa25.89■■□□□ 1.74
LRRC1-203ENST00000487251 USP17L2Q6R6M4 530 aa25.89■■□□□ 1.74
LRRC1-203ENST00000487251 CLEC10AQ8IUN9 316 aa25.89■■□□□ 1.74
LRRC1-203ENST00000487251 PCDHAC2Q9Y5I4 1007 aa25.89■■□□□ 1.74
LRRC1-203ENST00000487251 CHRNA5P30532 468 aa25.89■■□□□ 1.73
LRRC1-203ENST00000487251 ARID5BQ14865 1188 aa25.89■■□□□ 1.73
LRRC1-203ENST00000487251 RIOK3O14730 519 aaKnown RBP25.88■■□□□ 1.73
LRRC1-203ENST00000487251 HMGB2P26583 209 aaKnown RBP25.88■■□□□ 1.73
LRRC1-203ENST00000487251 MRFAP1L1Q96HT8 127 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 USP40Q9NVE5 1235 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 SPDYE4A6NLX3 237 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 KLRF2D3W0D1 207 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 ACTN4O43707 911 aaKnown RBP25.88■■□□□ 1.73
LRRC1-203ENST00000487251 CDC25BP30305 580 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 MCM7P33993 719 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 POSTNQ15063 836 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 HEATR3Q7Z4Q2 680 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 BLIDQ8IZY5 108 aa25.88■■□□□ 1.73
LRRC1-203ENST00000487251 SYMPKQ92797 1274 aaKnown RBP25.88■■□□□ 1.73
LRRC1-203ENST00000487251 VWA3AA6NCI4 1184 aa25.87■■□□□ 1.73
LRRC1-203ENST00000487251 DHX58Q96C10 678 aa25.87■■□□□ 1.73
LRRC1-203ENST00000487251 TPM3P06753 285 aa25.87■■□□□ 1.73
LRRC1-203ENST00000487251 NT5C2P49902 561 aa25.87■■□□□ 1.73
LRRC1-203ENST00000487251 EIF6P56537 245 aaKnown RBP25.87■■□□□ 1.73
LRRC1-203ENST00000487251 LMOD1P29536 600 aaPredicted RBP25.86■■□□□ 1.73
LRRC1-203ENST00000487251 CACTINQ8WUQ7 758 aaKnown RBP25.86■■□□□ 1.73
LRRC1-203ENST00000487251 TMX4Q9H1E5 349 aaPredicted RBP25.86■■□□□ 1.73
LRRC1-203ENST00000487251 HSD3B7Q9H2F3 369 aa25.86■■□□□ 1.73
LRRC1-203ENST00000487251 GNAQP50148 359 aa25.86■■□□□ 1.73
LRRC1-203ENST00000487251 AKR1B1P15121 316 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 ATP2C1P98194 919 aaPredicted RBP25.85■■□□□ 1.73
LRRC1-203ENST00000487251 CDC42EP5Q6NZY7 148 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 HOMER1Q86YM7 354 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 PDCL2Q8N4E4 241 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 MAN1B1Q9UKM7 699 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 PCDHA4Q9UN74 947 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 CASP1P29466 404 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 GABPAQ06546 454 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 NFIAQ12857 509 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 EZH2Q15910 746 aaKnown RBP25.85■■□□□ 1.73
LRRC1-203ENST00000487251 IL17AQ16552 155 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 VAT1LQ9HCJ6 419 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 SUGT1Q9Y2Z0 365 aa25.85■■□□□ 1.73
LRRC1-203ENST00000487251 USP17L5A8MUK1 530 aa25.84■■□□□ 1.73
LRRC1-203ENST00000487251 STXBP3O00186 592 aa25.84■■□□□ 1.73
LRRC1-203ENST00000487251 ATP1A3P13637 1013 aa25.84■■□□□ 1.73
LRRC1-203ENST00000487251 CACNB3P54284 484 aa25.84■■□□□ 1.73
LRRC1-203ENST00000487251 APOBEC3HQ6NTF7 200 aaKnown RBP25.84■■□□□ 1.73
LRRC1-203ENST00000487251 PARP1P09874 1014 aaKnown RBP25.84■■□□□ 1.73
LRRC1-203ENST00000487251 FILIP1Q7Z7B0 1213 aa25.84■■□□□ 1.73
LRRC1-203ENST00000487251 KIAA0825Q8IV33 1275 aa25.84■■□□□ 1.73
LRRC1-203ENST00000487251 XPO4Q9C0E2 1151 aaKnown RBP25.84■■□□□ 1.73
LRRC1-203ENST00000487251 IFNKQ9P0W0 207 aa25.84■■□□□ 1.73
LRRC1-203ENST00000487251 H0YIN7 160 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 CALML3P27482 149 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 EN1Q05925 392 aaPredicted RBP25.83■■□□□ 1.73
LRRC1-203ENST00000487251 ZFPM1Q8IX07 1006 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 LRRC47Q8N1G4 583 aaKnown RBP25.83■■□□□ 1.73
LRRC1-203ENST00000487251 GTPBP4Q9BZE4 634 aaKnown RBP25.83■■□□□ 1.73
LRRC1-203ENST00000487251 UBA5Q9GZZ9 404 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 SH3GLB2Q9NR46 395 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 FRMPD2Q68DX3 1309 aaPredicted RBP25.83■■□□□ 1.73
LRRC1-203ENST00000487251 M0R2N6 131 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 TOP1P11387 765 aaKnown RBP25.83■■□□□ 1.73
LRRC1-203ENST00000487251 AFMP43652 599 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 ANKRD7Q92527 254 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 BARHL2Q9NY43 387 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 PCDHA6Q9UN73 950 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 PCDHA8Q9Y5H6 950 aa25.83■■□□□ 1.73
LRRC1-203ENST00000487251 SMC2O95347 1197 aa25.82■■□□□ 1.72
LRRC1-203ENST00000487251 FERMT2Q96AC1 680 aa25.82■■□□□ 1.72
LRRC1-203ENST00000487251 TEKT1Q969V4 418 aa25.82■■□□□ 1.72
LRRC1-203ENST00000487251 MORC2Q9Y6X9 1032 aaPredicted RBP25.82■■□□□ 1.72
LRRC1-203ENST00000487251 ZNF646O15015 1829 aaPredicted RBP25.82■■□□□ 1.72
LRRC1-203ENST00000487251 SMTNL1A8MU46 457 aa25.81■■□□□ 1.72
LRRC1-203ENST00000487251 CRKP46108 304 aa25.81■■□□□ 1.72
LRRC1-203ENST00000487251 BMP15O95972 392 aa25.81■■□□□ 1.72
LRRC1-203ENST00000487251 ELOA2Q8IYF1 753 aaPredicted RBP25.81■■□□□ 1.72
LRRC1-203ENST00000487251 STAMQ92783 540 aa25.81■■□□□ 1.72
LRRC1-203ENST00000487251 SMARCE1Q969G3 411 aa25.81■■□□□ 1.72
LRRC1-203ENST00000487251 OSBPL5Q9H0X9 879 aaPredicted RBP25.81■■□□□ 1.72
LRRC1-203ENST00000487251 MTMR4Q9NYA4 1195 aa25.81■■□□□ 1.72
LRRC1-203ENST00000487251 HOOK1Q9UJC3 728 aaKnown RBP25.81■■□□□ 1.72
LRRC1-203ENST00000487251 IKBKBO14920 756 aa25.8■■□□□ 1.72
LRRC1-203ENST00000487251 SARSP49591 514 aaKnown RBP25.8■■□□□ 1.72
LRRC1-203ENST00000487251 HSP90AA4PQ58FG1 418 aa25.8■■□□□ 1.72
LRRC1-203ENST00000487251 SPZ1Q9BXG8 430 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms