RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	SEPT2	Q15019	361 aa		11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	SLFNL1	Q499Z3	407 aa		11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	COA7	Q96BR5	231 aa		11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	MKNK2	Q9HBH9	465 aa		11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	HOXC10	Q9NYD6	342 aa		11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	NYAP2	Q9P242	653 aa		11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.8	□□□□□ -0.52
KRIT1-223	ENST00000487168	MPHOSPH10	O00566	681 aa	Known RBP	11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	WDR46	O15213	610 aa	Known RBP	11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	FMNL1	O95466	1100 aa	Predicted RBP	11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	CHGB	P05060	677 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	APP	P05067	770 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	CYP2D6	P10635	497 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	SLC9C1	Q4G0N8	1177 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	CATSPERG	Q6ZRH7	1159 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	CCDC84	Q86UT8	332 aa	Predicted RBP	11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	TRMT44	Q8IYL2	757 aa	Known RBP	11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	GPRC5A	Q8NFJ5	357 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	SOCS4	Q8WXH5	440 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	MKL1	Q969V6	931 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	ZNF333	Q96JL9	665 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	VCPKMT	Q9H867	229 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	GOPC	Q9HD26	462 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	CCDC171	Q6TFL3	1326 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168	RAD50	Q92878	1312 aa		11.79	□□□□□ -0.52
KRIT1-223	ENST00000487168		A0A0G2JMZ2	1700 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	IGKV6D-41	A0A0C4DH26	115 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	CCDC85C	A6NKD9	419 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	TRIM6-TRIM34	B2RNG4	842 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	ORC4	O43929	436 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	XRCC5	P13010	732 aa	Known RBP	11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	AKR1B1	P15121	316 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	RASA1	P20936	1047 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	PPARA	Q07869	468 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	COG2	Q14746	738 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	SLC4A8	Q2Y0W8	1093 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	B4GALNT3	Q6L9W6	998 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	ANKRD13C	Q8N6S4	541 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	SLC44A5	Q8NCS7	719 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	ACER1	Q8TDN7	264 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	MARVELD3	Q96A59	401 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	DYNLL2	Q96FJ2	89 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168	PDE4DIP	Q5VU43	2346 aa		11.78	□□□□□ -0.52
KRIT1-223	ENST00000487168		A0A1W2PRG0	241 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	TNPO2	O14787	897 aa	Known RBP	11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	GPR37	O15354	613 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	FOXP2	O15409	715 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	SDS	P20132	328 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	COPB2	P35606	906 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	NOV	P48745	357 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	ERVK-9	P63128	1117 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	ERVK-24	P63145	666 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	SIAH1	Q8IUQ4	282 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	GMCL1P1	Q8NEA9	526 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	SHCBP1	Q8NEM2	672 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	NEDD1	Q8NHV4	660 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	RAET1E	Q8TD07	263 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	P2RX7	Q99572	595 aa	Known RBP	11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	DIAPH3	Q9NSV4	1193 aa		11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
KRIT1-223	ENST00000487168	ZNF236	Q9UL36	1845 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	CYP2D7	A0A087X1C5	515 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168		A0A0D9SFI3	127 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	MINDY4B	A8MYZ0	360 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	TTLL1	O95922	423 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	FDX1	P10109	184 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	HSPD1	P10809	573 aa	Known RBP	11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	GRK4	P32298	578 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	CAP1	Q01518	475 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	TTC22	Q5TAA0	569 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	ABRA	Q8N0Z2	381 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	NKX2-3	Q8TAU0	364 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	SEC62	Q99442	399 aa	Known RBP	11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	DSCC1	Q9BVC3	393 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	ARHGAP39	Q9C0H5	1083 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	RNF41	Q9H4P4	317 aa	Predicted RBP	11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	MTMR4	Q9NYA4	1195 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	RBPJL	Q9UBG7	517 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	ADAMTS5	Q9UNA0	930 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	PTCH2	Q9Y6C5	1203 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	RLF	Q13129	1914 aa		11.76	□□□□□ -0.53
KRIT1-223	ENST00000487168	LAMA4	Q16363	1823 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	STRN	O43815	780 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	EEF2	P13639	858 aa	Known RBP	11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	CTGF	P29279	349 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	UBXN2A	P68543	259 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	NMI	Q13287	307 aa	Predicted RBP	11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	RCSD1	Q6JBY9	416 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	PLPP6	Q8IY26	295 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	RUFY2	Q8WXA3	655 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	RILPL2	Q969X0	211 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	FAM227B	Q96M60	508 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	TCP11L1	Q9NUJ3	509 aa		11.75	□□□□□ -0.53
KRIT1-223	ENST00000487168	CTNNA3	Q9UI47	895 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms