RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 PPP1R9AQ9ULJ8 1098 aa22.74■■□□□ 1.23
CLIP2-206ENST00000487091 SYNPO2Q9UMS6 1093 aa22.74■■□□□ 1.23
CLIP2-206ENST00000487091 ZNF236Q9UL36 1845 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 F5H6K3 240 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 RAD21O60216 631 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 PRDM1O75626 825 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 SLC25A27O95847 323 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 KLRC3Q07444 240 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 PPARAQ07869 468 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 PLS1Q14651 629 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 TMEM132BQ14DG7 1078 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 FAM83BQ5T0W9 1011 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 NEDD1Q8NHV4 660 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 FBXO28Q9NVF7 368 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 MTMR4Q9NYA4 1195 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 CLIP2Q9UDT6 1046 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 NR2E3Q9Y5X4 410 aa22.73■■□□□ 1.23
CLIP2-206ENST00000487091 IGHA2P01877 340 aa22.72■■□□□ 1.23
CLIP2-206ENST00000487091 ADORA2AP29274 412 aa22.72■■□□□ 1.23
CLIP2-206ENST00000487091 CCND3P30281 292 aaPredicted RBP22.72■■□□□ 1.23
CLIP2-206ENST00000487091 HABP4Q5JVS0 413 aaKnown RBP22.72■■□□□ 1.23
CLIP2-206ENST00000487091 SAMD1Q6SPF0 538 aaPredicted RBP22.72■■□□□ 1.23
CLIP2-206ENST00000487091 CCDC129Q6ZRS4 1044 aa22.72■■□□□ 1.23
CLIP2-206ENST00000487091 DPP9Q86TI2 863 aa22.72■■□□□ 1.23
CLIP2-206ENST00000487091 NCAPG2Q86XI2 1143 aa22.72■■□□□ 1.23
CLIP2-206ENST00000487091 DIS3LQ8TF46 1054 aaKnown RBP22.72■■□□□ 1.23
CLIP2-206ENST00000487091 PLIN4Q96Q06 1357 aa22.72■■□□□ 1.23
CLIP2-206ENST00000487091 MYH4Q9Y623 1939 aa22.72■■□□□ 1.23
CLIP2-206ENST00000487091 COL11A1P12107 1806 aaPredicted RBP22.71■■□□□ 1.23
CLIP2-206ENST00000487091 VWA5AO00534 786 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 FOXP2O15409 715 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 NDUFB10O96000 172 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 IGHDP01880 384 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 MNX1P50219 401 aaPredicted RBP22.71■■□□□ 1.23
CLIP2-206ENST00000487091 LHX8Q68G74 356 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 CEP95Q96GE4 821 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 NBPF3Q9H094 633 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 SLC5A4Q9NY91 659 aa22.71■■□□□ 1.23
CLIP2-206ENST00000487091 TTLL1O95922 423 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 TSPY3P0CV98 308 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 TSPY8P0CW00 308 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 ALX1Q15699 326 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 OLFML2BQ68BL8 750 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 B4GALNT3Q6L9W6 998 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 CHD1LQ86WJ1 897 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 RIOX2Q8IUF8 465 aa22.7■■□□□ 1.22
CLIP2-206ENST00000487091 ZNFX1Q9P2E3 1918 aaKnown RBP22.69■■□□□ 1.22
CLIP2-206ENST00000487091 EVI5O60447 810 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 COBLO75128 1261 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 FCER1AP12319 257 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 COPB2P35606 906 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 STAT3P40763 770 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 TFAP4Q01664 338 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 NUCB1Q02818 461 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 MCMDC2Q4G0Z9 681 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 REPS2Q8NFH8 660 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 NUP88Q99567 741 aaPredicted RBP22.69■■□□□ 1.22
CLIP2-206ENST00000487091 SLF1Q9BQI6 1058 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 OSBPL3Q9H4L5 887 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 ANAPC4Q9UJX5 808 aa22.69■■□□□ 1.22
CLIP2-206ENST00000487091 ZNF214Q9UL59 606 aaPredicted RBP22.69■■□□□ 1.22
CLIP2-206ENST00000487091 MSCO60682 206 aa22.68■■□□□ 1.22
CLIP2-206ENST00000487091 FAM47AQ5JRC9 791 aa22.68■■□□□ 1.22
CLIP2-206ENST00000487091 PPP4R3BQ5MIZ7 849 aa22.68■■□□□ 1.22
CLIP2-206ENST00000487091 PRPF38AQ8NAV1 312 aaKnown RBP22.68■■□□□ 1.22
CLIP2-206ENST00000487091 GMCL1P1Q8NEA9 526 aa22.68■■□□□ 1.22
CLIP2-206ENST00000487091 C11orf49Q9H6J7 331 aa22.68■■□□□ 1.22
CLIP2-206ENST00000487091 COLQQ9Y215 455 aaPredicted RBP22.68■■□□□ 1.22
CLIP2-206ENST00000487091 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.68■■□□□ 1.22
CLIP2-206ENST00000487091 TRIM6-TRIM34B2RNG4 842 aa22.67■■□□□ 1.22
CLIP2-206ENST00000487091 CYP2C19P33261 490 aa22.67■■□□□ 1.22
CLIP2-206ENST00000487091 VPS53Q5VIR6 699 aa22.67■■□□□ 1.22
CLIP2-206ENST00000487091 PLEKHM2Q8IWE5 1019 aa22.67■■□□□ 1.22
CLIP2-206ENST00000487091 FAM227BQ96M60 508 aa22.67■■□□□ 1.22
CLIP2-206ENST00000487091 A0A0D9SFI3 127 aa22.66■■□□□ 1.22
CLIP2-206ENST00000487091 DDX20Q9UHI6 824 aaKnown RBP22.66■■□□□ 1.22
CLIP2-206ENST00000487091 FEM1BQ9UK73 627 aa22.66■■□□□ 1.22
CLIP2-206ENST00000487091 SUPT16HQ9Y5B9 1047 aaKnown RBP22.66■■□□□ 1.22
CLIP2-206ENST00000487091 ALPK3Q96L96 1907 aa22.65■■□□□ 1.22
CLIP2-206ENST00000487091 CYBAP13498 195 aa22.65■■□□□ 1.22
CLIP2-206ENST00000487091 CTDSPL2Q05D32 466 aa22.65■■□□□ 1.22
CLIP2-206ENST00000487091 RILPL2Q969X0 211 aa22.65■■□□□ 1.22
CLIP2-206ENST00000487091 MMP19Q99542 508 aa22.65■■□□□ 1.22
CLIP2-206ENST00000487091 TEX13BQ9BXU2 312 aa22.65■■□□□ 1.22
CLIP2-206ENST00000487091 DIS3Q9Y2L1 958 aaKnown RBP22.65■■□□□ 1.22
CLIP2-206ENST00000487091 TSPY2A6NKD2 308 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 ATP2A1O14983 1001 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 FGAP02671 866 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 FGRP09769 529 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 COL6A1P12109 1028 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 CNGA1P29973 690 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 SLFN13Q68D06 897 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 LRRC47Q8N1G4 583 aaKnown RBP22.64■■□□□ 1.21
CLIP2-206ENST00000487091 TRPV1Q8NER1 839 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 MAML3Q96JK9 1138 aa22.64■■□□□ 1.21
CLIP2-206ENST00000487091 ORC4O43929 436 aa22.63■■□□□ 1.21
CLIP2-206ENST00000487091 ZBED4O75132 1171 aa22.63■■□□□ 1.21
CLIP2-206ENST00000487091 HSPD1P10809 573 aaKnown RBP22.63■■□□□ 1.21
CLIP2-206ENST00000487091 BMP3P12645 472 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms