RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ZNF333Q96JL9 665 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
NEK4-204ENST00000487068 IL25Q9H293 177 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 INCENPQ9NQS7 918 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 PPP4R2Q9NY27 417 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 MTMR4Q9NYA4 1195 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 NYAP2Q9P242 653 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.07□□□□□ -0.48
NEK4-204ENST00000487068 NEDD4P46934 1319 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 ZNF236Q9UL36 1845 aa12.07□□□□□ -0.48
NEK4-204ENST00000487068 ORC4O43929 436 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 NMT2O60551 498 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 MYCP01106 439 aaPredicted RBP12.06□□□□□ -0.48
NEK4-204ENST00000487068 CTGFP29279 349 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 PRMT2P55345 433 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 CCNA1P78396 465 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 PRKCZQ05513 592 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 COG2Q14746 738 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 BMP2KLQ5H9B9 411 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 KIAA1755Q5JYT7 1200 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 STAG1Q8WVM7 1258 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 ESR2Q92731 530 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
NEK4-204ENST00000487068 TXNRD2Q9NNW7 524 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 BIN2Q9UBW5 565 aaPredicted RBP12.06□□□□□ -0.48
NEK4-204ENST00000487068 SRRDQ9UH36 339 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
NEK4-204ENST00000487068 MCM3APO60318 1980 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 BRCA2P51587 3418 aa12.06□□□□□ -0.48
NEK4-204ENST00000487068 IGKV6D-41A0A0C4DH26 115 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 F5H6K3 240 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 NDUFB10O96000 172 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
NEK4-204ENST00000487068 KLRC3Q07444 240 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 SIAH1Q8IUQ4 282 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 SH3TC2Q8TF17 1288 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 ATG4CQ96DT6 458 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 ANO2Q9NQ90 1003 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 MORF4L1Q9UBU8 362 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 GABRQQ9UN88 632 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
NEK4-204ENST00000487068 RABGAP1Q9Y3P9 1069 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 IVNS1ABPQ9Y6Y0 642 aa12.05□□□□□ -0.48
NEK4-204ENST00000487068 B4E1Z4 1266 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 SGSM2O43147 1006 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 CDC45O75419 566 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 MAPK4P31152 587 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 TRDNQ13061 729 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 CCDC96Q2M329 555 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 ZKSCAN3Q9BRR0 538 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 FBXO28Q9NVF7 368 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 RBPJLQ9UBG7 517 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 TACC3Q9Y6A5 838 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 SMCHD1A6NHR9 2005 aa12.04□□□□□ -0.48
NEK4-204ENST00000487068 KDM4AO75164 1064 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 BMP3P12645 472 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 GRK4P32298 578 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 DSG3P32926 999 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 SLC1A4P43007 532 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 SLC4A3P48751 1232 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 FLT3LGP49771 235 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 PTH1RQ03431 593 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 ERICH6BQ5W0A0 696 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 RALYLQ86SE5 291 aaKnown RBP12.03□□□□□ -0.48
NEK4-204ENST00000487068 MB21D1Q8N884 522 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 GMCL1P1Q8NEA9 526 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 KIFC2Q96AC6 838 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 SLF1Q9BQI6 1058 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 ESYT1Q9BSJ8 1104 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 UBAC1Q9BSL1 405 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 KRT23Q9C075 422 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 PORCNQ9H237 461 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 BTBD7Q9P203 1132 aa12.03□□□□□ -0.48
NEK4-204ENST00000487068 ADCY3O60266 1144 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 ELNP15502 786 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 MCCP23508 829 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 STAT2P52630 851 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 Q3C1V9 767 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 LBX2Q6XYB7 198 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 GPR142Q7Z601 462 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 NCAPG2Q86XI2 1143 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 NUDT12Q9BQG2 462 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 SPATC1LQ9H0A9 340 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 PPP1R9AQ9ULJ8 1098 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 SYNPO2Q9UMS6 1093 aa12.02□□□□□ -0.49
NEK4-204ENST00000487068 RBM8AQ9Y5S9 174 aaKnown RBP12.02□□□□□ -0.49
NEK4-204ENST00000487068 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 CNMDO75829 334 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 FGRP09769 529 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms