RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SLC35G1Q2M3R5 365 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 CCDC93Q567U6 631 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 CT47A1Q5JQC4 288 aaPredicted RBP13.68□□□□□ -0.22
PKP4-213ENST00000486254 C11orf57Q6ZUT1 292 aaPredicted RBP13.68□□□□□ -0.22
PKP4-213ENST00000486254 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 TRIML1Q8N9V2 468 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 MRFAP1L1Q96HT8 127 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 RIOX1Q9H6W3 641 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 DBNDD1Q9H9R9 158 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 SYNPO2Q9UMS6 1093 aa13.68□□□□□ -0.22
PKP4-213ENST00000486254 STXBP3O00186 592 aa13.67□□□□□ -0.22
PKP4-213ENST00000486254 ENTPD3O75355 529 aa13.67□□□□□ -0.22
PKP4-213ENST00000486254 SHMT1P34896 483 aa13.67□□□□□ -0.22
PKP4-213ENST00000486254 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
PKP4-213ENST00000486254 PPP1R18Q6NYC8 613 aa13.67□□□□□ -0.22
PKP4-213ENST00000486254 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
PKP4-213ENST00000486254 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
PKP4-213ENST00000486254 MYH4Q9Y623 1939 aa13.67□□□□□ -0.22
PKP4-213ENST00000486254 PTMAP06454 111 aaKnown RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 PDHBP11177 359 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 GNA11P29992 359 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 CHRNA5P30532 468 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 MDM2Q00987 491 aaPredicted RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 SLC4A8Q2Y0W8 1093 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 DHX40Q8IX18 779 aaKnown RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 TTLL6Q8N841 843 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 CNNM3Q8NE01 707 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 SPATA20Q8TB22 786 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 CLIC6Q96NY7 704 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 PI4KBQ9UBF8 816 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 BECN2A8MW95 431 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 F8W031 263 aaPredicted RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 AP5Z1O43299 807 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 PRPHP41219 470 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 MMP14P50281 582 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 SCNN1DP51172 638 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 ZNF75DP51815 510 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 PICALMQ13492 652 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 EARS2Q5JPH6 523 aaKnown RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 WWC2Q6AWC2 1192 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 KRT25Q7Z3Z0 450 aa13.66□□□□□ -0.22
PKP4-213ENST00000486254 FOXP4Q8IVH2 680 aaPredicted RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 SEC63Q9UGP8 760 aaKnown RBP13.66□□□□□ -0.22
PKP4-213ENST00000486254 hCG_1642624A0A1W2PR95 340 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 AKR1B1P15121 316 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 SEMA3FQ13275 785 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.22
PKP4-213ENST00000486254 TATDN1Q6P1N9 297 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 MKL1Q969V6 931 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 NYAP2Q9P242 653 aa13.65□□□□□ -0.22
PKP4-213ENST00000486254 ARFGEF1Q9Y6D6 1849 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 CCDC194A0A1B0GVG4 234 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 ACTN4O43707 911 aaKnown RBP13.64□□□□□ -0.23
PKP4-213ENST00000486254 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 LONP1P36776 959 aaKnown RBP13.64□□□□□ -0.23
PKP4-213ENST00000486254 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
PKP4-213ENST00000486254 TPM4P67936 248 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 POSTNQ15063 836 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 AOC3Q16853 763 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 DPCR1Q3MIW9 517 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 FKBP1CQ5VVH2 108 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 PIK3AP1Q6ZUJ8 805 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 KIAA0825Q8IV33 1275 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 MXD3Q9BW11 206 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 C6orf50Q9HD87 102 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 FAM198AQ9UFP1 575 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
PKP4-213ENST00000486254 BRCA1P38398 1863 aaKnown RBP13.64□□□□□ -0.23
PKP4-213ENST00000486254 PPIP5K2O43314 1243 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 NFIAQ12857 509 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 PTGDRQ13258 359 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 SH3RF1Q7Z6J0 888 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 MTMR8Q96EF0 704 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 TRIM5Q9C035 493 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 KANSL2Q9H9L4 492 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 PCDHA6Q9UN73 950 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 PCDHA8Q9Y5H6 950 aa13.63□□□□□ -0.23
PKP4-213ENST00000486254 VIL1P09327 827 aaKnown RBP13.62□□□□□ -0.23
PKP4-213ENST00000486254 VEGFAP15692 232 aaPredicted RBP13.62□□□□□ -0.23
PKP4-213ENST00000486254 GRIN1Q05586 938 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 HEATR3Q7Z4Q2 680 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 C4orf32Q8N8J7 132 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 MLKLQ8NB16 471 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 DCAF4Q8WV16 495 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.23
PKP4-213ENST00000486254 GMLQ99445 158 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms