RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 FLOT1O75955 427 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 RLBP1P12271 317 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 FCER1AP12319 257 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 TAL1P17542 331 aaPredicted RBP23.36■■□□□ 1.33
CHRD-216ENST00000486066 CEP85Q6P2H3 762 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 ANKRD33Q7Z3H0 272 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 USP38Q8NB14 1042 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 REPS2Q8NFH8 660 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 SDR42E1Q8WUS8 393 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 TINF2Q9BSI4 451 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 SWAP70Q9UH65 585 aa23.36■■□□□ 1.33
CHRD-216ENST00000486066 MPHOSPH10O00566 681 aaKnown RBP23.35■■□□□ 1.33
CHRD-216ENST00000486066 WDR46O15213 610 aaKnown RBP23.35■■□□□ 1.33
CHRD-216ENST00000486066 SLC25A27O95847 323 aa23.35■■□□□ 1.33
CHRD-216ENST00000486066 RARBP10826 455 aa23.35■■□□□ 1.33
CHRD-216ENST00000486066 AKR1B1P15121 316 aa23.35■■□□□ 1.33
CHRD-216ENST00000486066 GRIN2CQ14957 1233 aa23.35■■□□□ 1.33
CHRD-216ENST00000486066 RIOX2Q8IUF8 465 aa23.35■■□□□ 1.33
CHRD-216ENST00000486066 LCORLQ8N3X6 602 aa23.35■■□□□ 1.33
CHRD-216ENST00000486066 RNPC3Q96LT9 517 aaKnown RBP23.35■■□□□ 1.33
CHRD-216ENST00000486066 TOX2Q96NM4 488 aa23.35■■□□□ 1.33
CHRD-216ENST00000486066 ZNF214Q9UL59 606 aaPredicted RBP23.35■■□□□ 1.33
CHRD-216ENST00000486066 TRANK1O15050 2925 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 SMIM22K7EJ46 135 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 PGK1P00558 417 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 FAAP100Q0VG06 881 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 PLS1Q14651 629 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 TTF1Q15361 905 aaPredicted RBP23.34■■□□□ 1.33
CHRD-216ENST00000486066 SLC9C2Q5TAH2 1124 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 CCSAPQ6IQ19 270 aaPredicted RBP23.34■■□□□ 1.33
CHRD-216ENST00000486066 AACSQ86V21 672 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 SPICE1Q8N0Z3 855 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 DYNLL2Q96FJ2 89 aa23.34■■□□□ 1.33
CHRD-216ENST00000486066 ZNF532Q9HCE3 1301 aa23.33■■□□□ 1.33
CHRD-216ENST00000486066 MYCNP04198 464 aaPredicted RBP23.33■■□□□ 1.33
CHRD-216ENST00000486066 ICA1Q05084 483 aa23.33■■□□□ 1.33
CHRD-216ENST00000486066 RNF180Q86T96 592 aa23.33■■□□□ 1.33
CHRD-216ENST00000486066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.33■■□□□ 1.33
CHRD-216ENST00000486066 SYMPKQ92797 1274 aaKnown RBP23.33■■□□□ 1.33
CHRD-216ENST00000486066 PGK2P07205 417 aa23.32■■□□□ 1.32
CHRD-216ENST00000486066 DNAJB2P25686 324 aa23.32■■□□□ 1.32
CHRD-216ENST00000486066 KLHDC9Q8NEP7 349 aa23.32■■□□□ 1.32
CHRD-216ENST00000486066 TSEN34Q9BSV6 310 aaKnown RBP23.32■■□□□ 1.32
CHRD-216ENST00000486066 ARHGEF10LQ9HCE6 1279 aa23.32■■□□□ 1.32
CHRD-216ENST00000486066 FBXO28Q9NVF7 368 aa23.32■■□□□ 1.32
CHRD-216ENST00000486066 TBX21Q9UL17 535 aa23.32■■□□□ 1.32
CHRD-216ENST00000486066 EXOC6BQ9Y2D4 811 aa23.32■■□□□ 1.32
CHRD-216ENST00000486066 FPGSQ05932 587 aa23.31■■□□□ 1.32
CHRD-216ENST00000486066 RASIP1Q5U651 963 aa23.31■■□□□ 1.32
CHRD-216ENST00000486066 ERC1Q8IUD2 1116 aa23.31■■□□□ 1.32
CHRD-216ENST00000486066 LENG1Q96BZ8 264 aaPredicted RBP23.31■■□□□ 1.32
CHRD-216ENST00000486066 MMP19Q99542 508 aa23.31■■□□□ 1.32
CHRD-216ENST00000486066 SH2D4AQ9H788 454 aa23.31■■□□□ 1.32
CHRD-216ENST00000486066 MYH7P12883 1935 aa23.31■■□□□ 1.32
CHRD-216ENST00000486066 MYO9BQ13459 2157 aa23.31■■□□□ 1.32
CHRD-216ENST00000486066 VWA5AO00534 786 aa23.3■■□□□ 1.32
CHRD-216ENST00000486066 PQBP1O60828 265 aaKnown RBP23.3■■□□□ 1.32
CHRD-216ENST00000486066 AKR1A1P14550 325 aa23.3■■□□□ 1.32
CHRD-216ENST00000486066 RAG1P15918 1043 aa23.3■■□□□ 1.32
CHRD-216ENST00000486066 CCDC17Q96LX7 622 aa23.3■■□□□ 1.32
CHRD-216ENST00000486066 PPP1R9AQ9ULJ8 1098 aa23.3■■□□□ 1.32
CHRD-216ENST00000486066 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
CHRD-216ENST00000486066 SYNRGQ9UMZ2 1314 aa23.3■■□□□ 1.32
CHRD-216ENST00000486066 MCM3APO60318 1980 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.29■■□□□ 1.32
CHRD-216ENST00000486066 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.29■■□□□ 1.32
CHRD-216ENST00000486066 CCER2I3L3R5 266 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 PRKAB2O43741 272 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 ACLYP53396 1101 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 TJAP1Q5JTD0 557 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 C12orf60Q5U649 245 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 C16orf59Q7L2K0 433 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 TMEM39AQ9NV64 488 aa23.29■■□□□ 1.32
CHRD-216ENST00000486066 STAT3P40763 770 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 CDK8P49336 464 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 CDK7P50613 346 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 MAMDC4Q6UXC1 1216 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 C16orf86Q6ZW13 317 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 MSL3Q8N5Y2 521 aaKnown RBP23.28■■□□□ 1.32
CHRD-216ENST00000486066 RHPN1Q8TCX5 695 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.28■■□□□ 1.32
CHRD-216ENST00000486066 ARMT1Q9H993 441 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 IL1RAPL2Q9NP60 686 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 ATP8A2Q9NTI2 1148 aa23.28■■□□□ 1.32
CHRD-216ENST00000486066 DNAJC25-GNG10A0A024R161 153 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 MOXD2PA6NHM9 499 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 GOLIM4O00461 696 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 SNAI1O95863 264 aaPredicted RBP23.27■■□□□ 1.32
CHRD-216ENST00000486066 TIMP1P01033 207 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 EEF2P13639 858 aaKnown RBP23.27■■□□□ 1.32
CHRD-216ENST00000486066 CST5P28325 142 aaPredicted RBP23.27■■□□□ 1.32
CHRD-216ENST00000486066 KCTD2Q14681 263 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 SLFNL1Q499Z3 407 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.27■■□□□ 1.32
CHRD-216ENST00000486066 ITPRIPQ8IWB1 547 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.27■■□□□ 1.325e-8■□□□□ 10.4
CHRD-216ENST00000486066 ZNF576Q9H609 170 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 SYNGAP1Q96PV0 1343 aa23.27■■□□□ 1.32
CHRD-216ENST00000486066 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
CHRD-216ENST00000486066 COPB2P35606 906 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms