RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 GRNP28799 593 aaKnown RBP8.72□□□□□ -1.01
SMC4-217ENST00000485867 GSX2Q9BZM3 304 aa8.72□□□□□ -1.01
SMC4-217ENST00000485867 VRTNQ9H8Y1 702 aa8.72□□□□□ -1.01
SMC4-217ENST00000485867 POLLQ9UGP5 575 aa8.72□□□□□ -1.01
SMC4-217ENST00000485867 SLC6A14Q9UN76 642 aa8.72□□□□□ -1.01
SMC4-217ENST00000485867 SCAF8Q9UPN6 1271 aaKnown RBP8.72□□□□□ -1.01
SMC4-217ENST00000485867 PTPN22Q9Y2R2 807 aa8.72□□□□□ -1.01
SMC4-217ENST00000485867 HSPA5P11021 654 aaKnown RBP8.71□□□□□ -1.02
SMC4-217ENST00000485867 TAF7Q15545 349 aaPredicted RBP8.71□□□□□ -1.02
SMC4-217ENST00000485867 PRAMEF18Q5VWM3 479 aa8.71□□□□□ -1.02
SMC4-217ENST00000485867 UBE2OQ9C0C9 1292 aaKnown RBP8.71□□□□□ -1.02
SMC4-217ENST00000485867 MIS18AQ9NYP9 233 aa8.71□□□□□ -1.02
SMC4-217ENST00000485867 LILRB5O75023 590 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 WEE1P30291 646 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 GPSM2P81274 684 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 PTPN12Q05209 780 aaKnown RBP8.7□□□□□ -1.02
SMC4-217ENST00000485867 TRIM28Q13263 835 aaKnown RBP8.7□□□□□ -1.02
SMC4-217ENST00000485867 LRP10Q7Z4F1 713 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 NLRP10Q86W26 655 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 AGBL3Q8NEM8 1001 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 CD99L2Q8TCZ2 262 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 ERO1AQ96HE7 468 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 ZNF333Q96JL9 665 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 GMLQ99445 158 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 EYA3Q99504 573 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 MYOZ2Q9NPC6 264 aa8.7□□□□□ -1.02
SMC4-217ENST00000485867 HTATSF1O43719 755 aaKnown RBP8.69□□□□□ -1.02
SMC4-217ENST00000485867 INPP5BP32019 993 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 EIF4A1P60842 406 aaKnown RBP8.69□□□□□ -1.02
SMC4-217ENST00000485867 CAP1Q01518 475 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 TCIRG1Q13488 830 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 CCINQ13939 588 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 CC2D1BQ5T0F9 858 aaKnown RBP8.69□□□□□ -1.02
SMC4-217ENST00000485867 TBC1D16Q8TBP0 767 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 CELF1Q92879 486 aaKnown RBP8.69□□□□□ -1.02
SMC4-217ENST00000485867 DNAJB12Q9NXW2 375 aaKnown RBP8.69□□□□□ -1.02
SMC4-217ENST00000485867 KLK14Q9P0G3 267 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 NAGPAQ9UK23 515 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.69□□□□□ -1.02
SMC4-217ENST00000485867 SH3TC1Q8TE82 1336 aa8.69□□□□□ -1.02
SMC4-217ENST00000485867 MANSC4A6NHS7 340 aaPredicted RBP8.68□□□□□ -1.02
SMC4-217ENST00000485867 IGF2BP3O00425 579 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMC4-217ENST00000485867 NFKB1P19838 968 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 NF2P35240 595 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 GRIK4Q16099 956 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 RSPO4Q2I0M5 234 aaPredicted RBP8.68□□□□□ -1.02
SMC4-217ENST00000485867 LDLRAD1Q5T700 205 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 ARMC9Q7Z3E5 817 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 THUMPD2Q9BTF0 503 aaKnown RBP8.68□□□□□ -1.02
SMC4-217ENST00000485867 PRO3102Q9H379 93 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 SEMA6BQ9H3T3 888 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 IGFLR1Q9H665 355 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 ZSWIM8A7E2V4 1837 aa8.68□□□□□ -1.02
SMC4-217ENST00000485867 INHBEP58166 350 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 CRHR2Q13324 411 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 PRKG1Q13976 671 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 LAMA3Q16787 3333 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 NBPF9Q3BBW0 867 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 HSP90AB3PQ58FF7 597 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 NKAPLQ5M9Q1 402 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 ECM29Q5VYK3 1845 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 Q8N3U1 123 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 PNISRQ8TF01 805 aaKnown RBP8.67□□□□□ -1.02
SMC4-217ENST00000485867 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 NACC1Q96RE7 527 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 ZC3H12CQ9C0D7 883 aaKnown RBP8.67□□□□□ -1.02
SMC4-217ENST00000485867 JPH1Q9HDC5 661 aaPredicted RBP8.67□□□□□ -1.02
SMC4-217ENST00000485867 TPSG1Q9NRR2 321 aa8.67□□□□□ -1.02
SMC4-217ENST00000485867 TRMT112Q9UI30 125 aaKnown RBP8.67□□□□□ -1.02
SMC4-217ENST00000485867 OTOFQ9HC10 1997 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 IDH3AP50213 366 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 SF3B3Q15393 1217 aaKnown RBP8.66□□□□□ -1.02
SMC4-217ENST00000485867 PROSER3Q2NL68 480 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 SLC4A8Q2Y0W8 1093 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 SLC9C1Q4G0N8 1177 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 NUDT8Q8WV74 236 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 MYO19Q96H55 970 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 PODXL2Q9NZ53 605 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 TIMELESSQ9UNS1 1208 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 PTCH2Q9Y6C5 1203 aa8.66□□□□□ -1.02
SMC4-217ENST00000485867 A0A0A0MRY4 1105 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 WNT10BO00744 389 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 UFL1O94874 794 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 MAP3K6O95382 1288 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 ANXA1P04083 346 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 ZBTB48P10074 688 aaPredicted RBP8.65□□□□□ -1.02
SMC4-217ENST00000485867 EPB42P16452 691 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 AFF1P51825 1210 aaKnown RBP8.65□□□□□ -1.02
SMC4-217ENST00000485867 SP3Q02447 781 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 PSAPL1Q6NUJ1 521 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 WNK4Q96J92 1243 aa8.65□□□□□ -1.02
SMC4-217ENST00000485867 ANGEL1Q9UNK9 670 aaKnown RBP8.65□□□□□ -1.02
SMC4-217ENST00000485867 SSC5DA1L4H1 1573 aa8.65□□□□□ -1.03
SMC4-217ENST00000485867 SOX1O00570 391 aaPredicted RBP8.64□□□□□ -1.03
SMC4-217ENST00000485867 U2AF1L5P0DN76 240 aaPredicted RBP8.64□□□□□ -1.03
SMC4-217ENST00000485867 ELNP15502 786 aa8.64□□□□□ -1.03
SMC4-217ENST00000485867 SELPP16109 830 aa8.64□□□□□ -1.03
SMC4-217ENST00000485867 U2AF1Q01081 240 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMC4-217ENST00000485867 NBPF11Q86T75 865 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms