RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CYBAP13498 195 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 SYN1P17600 705 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 BMP8BP34820 402 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 TMEM132BQ14DG7 1078 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 TRPV1Q8NER1 839 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.51■□□□□ 0.87
SMC4-216ENST00000485645 FBXO28Q9NVF7 368 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 ADAMTS5Q9UNA0 930 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 APPP05067 770 aa20.5■□□□□ 0.87
SMC4-216ENST00000485645 FCER1AP12319 257 aa20.5■□□□□ 0.87
SMC4-216ENST00000485645 RASA1P20936 1047 aa20.5■□□□□ 0.87
SMC4-216ENST00000485645 TDO2P48775 406 aa20.5■□□□□ 0.87
SMC4-216ENST00000485645 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
SMC4-216ENST00000485645 EPB41L4AQ9HCS5 686 aaPredicted RBP20.5■□□□□ 0.87
SMC4-216ENST00000485645 PARP14Q460N5 1801 aa20.5■□□□□ 0.87
SMC4-216ENST00000485645 FRMPD3Q5JV73 1810 aa20.5■□□□□ 0.87
SMC4-216ENST00000485645 ROBO3Q96MS0 1386 aa20.49■□□□□ 0.87
SMC4-216ENST00000485645 PATL2C9JE40 543 aaKnown RBP20.49■□□□□ 0.87
SMC4-216ENST00000485645 M0R2C6 588 aa20.49■□□□□ 0.87
SMC4-216ENST00000485645 LRRC26Q2I0M4 334 aa20.49■□□□□ 0.87
SMC4-216ENST00000485645 SENP6Q9GZR1 1112 aaPredicted RBP20.49■□□□□ 0.87
SMC4-216ENST00000485645 ZNF287Q9HBT7 754 aa20.49■□□□□ 0.87
SMC4-216ENST00000485645 NYAP2Q9P242 653 aa20.49■□□□□ 0.87
SMC4-216ENST00000485645 PPP1R9AQ9ULJ8 1098 aa20.49■□□□□ 0.87
SMC4-216ENST00000485645 VWA5AO00534 786 aa20.48■□□□□ 0.87
SMC4-216ENST00000485645 RIOX2Q8IUF8 465 aa20.48■□□□□ 0.87
SMC4-216ENST00000485645 IFNL3Q8IZI9 196 aa20.48■□□□□ 0.87
SMC4-216ENST00000485645 ZNF444Q8N0Y2 327 aaPredicted RBP20.48■□□□□ 0.87
SMC4-216ENST00000485645 PI4K2BQ8TCG2 481 aa20.48■□□□□ 0.87
SMC4-216ENST00000485645 GREB1LQ9C091 1923 aaPredicted RBP20.47■□□□□ 0.87
SMC4-216ENST00000485645 ZNFX1Q9P2E3 1918 aaKnown RBP20.47■□□□□ 0.87
SMC4-216ENST00000485645 DNM1LO00429 736 aa20.47■□□□□ 0.87
SMC4-216ENST00000485645 STAT3P40763 770 aa20.47■□□□□ 0.87
SMC4-216ENST00000485645 MAGEA10P43363 369 aaPredicted RBP20.47■□□□□ 0.87
SMC4-216ENST00000485645 MAML3Q96JK9 1138 aa20.47■□□□□ 0.87
SMC4-216ENST00000485645 MMP19Q99542 508 aa20.47■□□□□ 0.87
SMC4-216ENST00000485645 FSD1Q9BTV5 496 aa20.47■□□□□ 0.87
SMC4-216ENST00000485645 NACAP1Q9BZK3 213 aa20.47■□□□□ 0.87
SMC4-216ENST00000485645 COL11A1P12107 1806 aaPredicted RBP20.47■□□□□ 0.87
SMC4-216ENST00000485645 F5H6K3 240 aa20.46■□□□□ 0.87
SMC4-216ENST00000485645 SEPT4O43236 478 aa20.46■□□□□ 0.87
SMC4-216ENST00000485645 COPB2P35606 906 aa20.46■□□□□ 0.87
SMC4-216ENST00000485645 RRP1P56182 461 aaKnown RBP20.46■□□□□ 0.87
SMC4-216ENST00000485645 KLRC3Q07444 240 aa20.46■□□□□ 0.87
SMC4-216ENST00000485645 KCTD2Q14681 263 aa20.46■□□□□ 0.87
SMC4-216ENST00000485645 ARRDC4Q8NCT1 418 aa20.46■□□□□ 0.87
SMC4-216ENST00000485645 OTUD7AQ8TE49 926 aaPredicted RBP20.46■□□□□ 0.87
SMC4-216ENST00000485645 SEC62Q99442 399 aaKnown RBP20.46■□□□□ 0.87
SMC4-216ENST00000485645 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
SMC4-216ENST00000485645 ZBTB47Q9UFB7 747 aaPredicted RBP20.46■□□□□ 0.87
SMC4-216ENST00000485645 PRDM1O75626 825 aa20.45■□□□□ 0.86
SMC4-216ENST00000485645 MX1P20591 662 aa20.45■□□□□ 0.86
SMC4-216ENST00000485645 PRAMEF19Q5SWL8 479 aa20.45■□□□□ 0.86
SMC4-216ENST00000485645 REPS2Q8NFH8 660 aa20.45■□□□□ 0.86
SMC4-216ENST00000485645 NUP88Q99567 741 aaPredicted RBP20.45■□□□□ 0.86
SMC4-216ENST00000485645 SLF1Q9BQI6 1058 aa20.45■□□□□ 0.86
SMC4-216ENST00000485645 ZNF214Q9UL59 606 aaPredicted RBP20.45■□□□□ 0.86
SMC4-216ENST00000485645 IGKV6D-41A0A0C4DH26 115 aa20.44■□□□□ 0.86
SMC4-216ENST00000485645 SOX1O00570 391 aaPredicted RBP20.44■□□□□ 0.86
SMC4-216ENST00000485645 NDUFB10O96000 172 aa20.44■□□□□ 0.86
SMC4-216ENST00000485645 PGK2P07205 417 aa20.44■□□□□ 0.86
SMC4-216ENST00000485645 ATN1P54259 1190 aaPredicted RBP20.44■□□□□ 0.86
SMC4-216ENST00000485645 GJC2Q5T442 439 aaPredicted RBP20.44■□□□□ 0.86
SMC4-216ENST00000485645 ANO1Q5XXA6 986 aa20.44■□□□□ 0.86
SMC4-216ENST00000485645 LAMA3Q16787 3333 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 KBTBD13C9JR72 458 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 SLC3A2P08195 630 aaKnown RBP20.43■□□□□ 0.86
SMC4-216ENST00000485645 PDE4BQ07343 736 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 ZMYM1Q5SVZ6 1142 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 PRPF38AQ8NAV1 312 aaKnown RBP20.43■□□□□ 0.86
SMC4-216ENST00000485645 MKL1Q969V6 931 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 CEP95Q96GE4 821 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 LRCH3Q96II8 777 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 UBE2OQ9C0C9 1292 aaKnown RBP20.43■□□□□ 0.86
SMC4-216ENST00000485645 NAPBQ9H115 298 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 MTMR4Q9NYA4 1195 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 NRBP1Q9UHY1 535 aa20.43■□□□□ 0.86
SMC4-216ENST00000485645 DIS3Q9Y2L1 958 aaKnown RBP20.43■□□□□ 0.86
SMC4-216ENST00000485645 TTLL1O95922 423 aa20.42■□□□□ 0.86
SMC4-216ENST00000485645 MYCNP04198 464 aaPredicted RBP20.42■□□□□ 0.86
SMC4-216ENST00000485645 ZNF792Q3KQV3 632 aa20.42■□□□□ 0.86
SMC4-216ENST00000485645 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
SMC4-216ENST00000485645 TDHQ8IZJ6 230 aa20.42■□□□□ 0.86
SMC4-216ENST00000485645 TEX13BQ9BXU2 312 aa20.42■□□□□ 0.86
SMC4-216ENST00000485645 CTDP1Q9Y5B0 961 aaPredicted RBP20.42■□□□□ 0.86
SMC4-216ENST00000485645 MYH4Q9Y623 1939 aa20.42■□□□□ 0.86
SMC4-216ENST00000485645 DNAH12Q6ZR08 3092 aa20.41■□□□□ 0.86
SMC4-216ENST00000485645 ZBED4O75132 1171 aa20.41■□□□□ 0.86
SMC4-216ENST00000485645 TSPY3P0CV98 308 aa20.41■□□□□ 0.86
SMC4-216ENST00000485645 TSPY8P0CW00 308 aa20.41■□□□□ 0.86
SMC4-216ENST00000485645 SNRNP48Q6IEG0 339 aaKnown RBP20.41■□□□□ 0.86
SMC4-216ENST00000485645 CRBNQ96SW2 442 aa20.41■□□□□ 0.86
SMC4-216ENST00000485645 TINF2Q9BSI4 451 aa20.41■□□□□ 0.86
SMC4-216ENST00000485645 SYNPO2Q9UMS6 1093 aa20.41■□□□□ 0.86
SMC4-216ENST00000485645 RTP1P59025 263 aa20.4■□□□□ 0.86
SMC4-216ENST00000485645 MDM2Q00987 491 aaPredicted RBP20.4■□□□□ 0.86
SMC4-216ENST00000485645 PPARAQ07869 468 aa20.4■□□□□ 0.86
SMC4-216ENST00000485645 LRIT3Q3SXY7 679 aa20.4■□□□□ 0.86
SMC4-216ENST00000485645 NEDD1Q8NHV4 660 aa20.4■□□□□ 0.86
SMC4-216ENST00000485645 KIFC2Q96AC6 838 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms