RNA–Protein interactions for RNA: ENST00000484922.1

SHROOM4-205, Transcript of shroom family member 4, humanhuman

TSL 5

Gene SHROOM4, Length 295 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-205ENST00000484922 ARHGEF6Q15052 776 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 GRIK5Q16478 980 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 MAP3K11Q16584 847 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 MCMDC2Q4G0Z9 681 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 NBPF12Q5TAG4 269 aaPredicted RBP3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 CST9Q5W186 159 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 KIAA1211Q6ZU35 1233 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 ERO1BQ86YB8 467 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 PLEKHM2Q8IWE5 1019 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 MIGA1Q8NAN2 632 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 PI4K2BQ8TCG2 481 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 SH3RF3Q8TEJ3 882 aaPredicted RBP3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 ITPKCQ96DU7 683 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 KLRG1Q96E93 195 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 CAPNS2Q96L46 248 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 CCDC17Q96LX7 622 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 WRNIP1Q96S55 665 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 TMEM39BQ9GZU3 492 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 NAPBQ9H115 298 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 EHD4Q9H223 541 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 SH2D4AQ9H788 454 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 PIH1D3Q9NQM4 214 aaKnown RBP3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 MCM9Q9NXL9 1143 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 SWAP70Q9UH65 585 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 CTNNA3Q9UI47 895 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 SERPINB13Q9UIV8 391 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 SLC4A4Q9Y6R1 1079 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 MYH4Q9Y623 1939 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 GOLGB1Q14789 3259 aaKnown RBP3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 OTOFQ9HC10 1997 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 RAD50Q92878 1312 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 SALL3Q9BXA9 1300 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 WDR33Q9C0J8 1336 aaKnown RBP3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 CNTNAP1P78357 1384 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 ATRNL1Q5VV63 1379 aa3.1□□□□□ -1.91
SHROOM4-205ENST00000484922 PTPRFP10586 1907 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 TCRBV5S4A2TA0A5A2 114 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 C19orf81C9J6K1 198 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 UBE2Q2LH0YL09 131 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 GPAA1O43292 621 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 USP2O75604 605 aaPredicted RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 ZIC2O95409 532 aaPredicted RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 NR3C2P08235 984 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 VSIG8P0DPA2 414 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PCP11498 1178 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 CETPP11597 493 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 SDSP20132 328 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 GTF2A2P52657 109 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 CACNB3P54284 484 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 USP14P54578 494 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 RHBDL3P58872 404 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 DYNLL1P63167 89 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 KRT76Q01546 638 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 MAP3K10Q02779 954 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PPATQ06203 517 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 KCNMA1Q12791 1236 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 NFIAQ12857 509 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 TRDNQ13061 729 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PABPC4Q13310 644 aaKnown RBP eCLIP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 SNAPC2Q13487 334 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PTPRNQ16849 979 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 IMMTQ16891 758 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 CERKLQ49MI3 558 aaPredicted RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 SBK1Q52WX2 424 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 CCDC178Q5BJE1 867 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 C4orf48Q5BLP8 95 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 ZMYM1Q5SVZ6 1142 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 LDLRAD1Q5T700 205 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 TTC22Q5TAA0 569 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 RNF20Q5VTR2 975 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PRAMEF18Q5VWM3 479 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 TSHZ3Q63HK5 1081 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 CWC27Q6UX04 472 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 MIGA2Q7L4E1 593 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 FASTKD5Q7L8L6 764 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 MAPKAPK5Q8IW41 473 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 SCYL3Q8IZE3 742 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 ZNF444Q8N0Y2 327 aaPredicted RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 SDR42E1Q8WUS8 393 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 EDC3Q96F86 508 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 TEPSINQ96N21 525 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 STRBPQ96SI9 672 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 RIOK1Q9BRS2 568 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PUS7LQ9H0K6 701 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 RNF41Q9H4P4 317 aaPredicted RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 ARMT1Q9H993 441 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 MKNK2Q9HBH9 465 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 ARHGEF10LQ9HCE6 1279 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 ZCCHC17Q9NP64 241 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 DCP1AQ9NPI6 582 aaPredicted RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 TOMM22Q9NS69 142 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 MKRN1Q9UHC7 482 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PALD1Q9ULE6 856 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 PCDHAC2Q9Y5I4 1007 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 NDUFB9Q9Y6M9 179 aa3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 DDX60LQ5H9U9 1706 aaKnown RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 ASTN2O75129 1339 aaPredicted RBP3.09□□□□□ -1.91
SHROOM4-205ENST00000484922 FLT1P17948 1338 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms