RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TRIB2Q92519 343 aa14.58□□□□□ -0.08
MSH5-216ENST00000484309 MOV10L1Q9BXT6 1211 aaKnown RBP14.58□□□□□ -0.08
MSH5-216ENST00000484309 MTMR4Q9NYA4 1195 aa14.58□□□□□ -0.08
MSH5-216ENST00000484309 HOXC10Q9NYD6 342 aa14.58□□□□□ -0.08
MSH5-216ENST00000484309 BRCA2P51587 3418 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 TSPY2A6NKD2 308 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 F5H6K3 240 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 RANBP6O60518 1105 aaKnown RBP14.57□□□□□ -0.08
MSH5-216ENST00000484309 TTLL1O95922 423 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 KLRC3Q07444 240 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 CCL14Q16627 93 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 TICAM2Q86XR7 235 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 SOCS4Q8WXH5 440 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 SHISA4Q96DD7 197 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 SPATC1LQ9H0A9 340 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 ANAPC4Q9UJX5 808 aa14.57□□□□□ -0.08
MSH5-216ENST00000484309 ISY1Q9ULR0 285 aaKnown RBP14.57□□□□□ -0.08
MSH5-216ENST00000484309 HMGCRP04035 888 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 RGS2P41220 211 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 MFAP1P55081 439 aaKnown RBP14.56□□□□□ -0.08
MSH5-216ENST00000484309 MORN1Q5T089 497 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 IL25Q9H293 177 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 STX8Q9UNK0 236 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 IVNS1ABPQ9Y6Y0 642 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 ZMYM6O95789 1325 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 SMCHD1A6NHR9 2005 aa14.56□□□□□ -0.08
MSH5-216ENST00000484309 ALPK3Q96L96 1907 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 HIP1O00291 1037 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
MSH5-216ENST00000484309 ERCC3P19447 782 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 PTPREP23469 700 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 MAP2K5Q13163 448 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 TMEM132BQ14DG7 1078 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 RASGRP2Q7LDG7 609 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 SKAP1Q86WV1 359 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 NCAPG2Q86XI2 1143 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 TBC1D10CQ8IV04 446 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 MB21D1Q8N884 522 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 USP6NLQ92738 828 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 DEFB118Q96PH6 123 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 APBA2Q99767 749 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 IL17RBQ9NRM6 502 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 PPP1R9AQ9ULJ8 1098 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 MTMR7Q9Y216 660 aa14.55□□□□□ -0.08
MSH5-216ENST00000484309 MCM3APO60318 1980 aa14.54□□□□□ -0.08
MSH5-216ENST00000484309 SLC15A5A6NIM6 579 aa14.54□□□□□ -0.08
MSH5-216ENST00000484309 ORC4O43929 436 aa14.54□□□□□ -0.08
MSH5-216ENST00000484309 GJB1P08034 283 aa14.54□□□□□ -0.08
MSH5-216ENST00000484309 SLFN13Q68D06 897 aa14.54□□□□□ -0.08
MSH5-216ENST00000484309 U2AF1L4Q8WU68 220 aaKnown RBP14.54□□□□□ -0.08
MSH5-216ENST00000484309 MKL1Q969V6 931 aa14.54□□□□□ -0.08
MSH5-216ENST00000484309 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
MSH5-216ENST00000484309 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.54□□□□□ -0.08
MSH5-216ENST00000484309 NEDD4P46934 1319 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 VWA5AO00534 786 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
MSH5-216ENST00000484309 GJA8P48165 433 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 GRB14Q14449 540 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 GMCL1P1Q8NEA9 526 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 NPLOC4Q8TAT6 608 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 KIFC2Q96AC6 838 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 FLRT1Q9NZU1 646 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 ADAMTS5Q9UNA0 930 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 MYH6P13533 1939 aa14.53□□□□□ -0.08
MSH5-216ENST00000484309 SGPL1O95470 568 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 FGRP09769 529 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 BMP3P12645 472 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 XRCC5P13010 732 aaKnown RBP14.52□□□□□ -0.09
MSH5-216ENST00000484309 MCCP23508 829 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 ADORA2AP29274 412 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 AKNAD1Q5T1N1 836 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 MFSD6Q6ZSS7 791 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 SHCBP1Q8NEM2 672 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 REPS2Q8NFH8 660 aa14.52□□□□□ -0.09
MSH5-216ENST00000484309 PAK6Q9NQU5 681 aaPredicted RBP14.52□□□□□ -0.09
MSH5-216ENST00000484309 ZNF214Q9UL59 606 aaPredicted RBP14.52□□□□□ -0.09
MSH5-216ENST00000484309 RPTORQ8N122 1335 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 TMEM232C9JQI7 657 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 ZNF213O14771 459 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 TFRCP02786 760 aaKnown RBP14.51□□□□□ -0.09
MSH5-216ENST00000484309 CHMLP26374 656 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 CCND3P30281 292 aaPredicted RBP14.51□□□□□ -0.09
MSH5-216ENST00000484309 STAT3P40763 770 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 CACNB2Q08289 660 aaPredicted RBP14.51□□□□□ -0.09
MSH5-216ENST00000484309 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
MSH5-216ENST00000484309 KCTD1Q719H9 257 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 DPP9Q86TI2 863 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 CPXCR1Q8N123 301 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 STAG1Q8WVM7 1258 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 ZKSCAN3Q9BRR0 538 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 DSCC1Q9BVC3 393 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 MROH8Q9H579 483 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 HMX1Q9NP08 348 aaPredicted RBP14.51□□□□□ -0.09
MSH5-216ENST00000484309 CTDP1Q9Y5B0 961 aaPredicted RBP14.51□□□□□ -0.09
MSH5-216ENST00000484309 CEP290O15078 2479 aa14.51□□□□□ -0.09
MSH5-216ENST00000484309 COBLO75128 1261 aa14.5□□□□□ -0.09
MSH5-216ENST00000484309 FARP2O94887 1054 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms