RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 EHD4Q9H223 541 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 INCENPQ9NQS7 918 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 PDRG1Q9NUG6 133 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 PTCH2Q9Y6C5 1203 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 RLFQ13129 1914 aa8.16□□□□□ -1.1
BRCA1-216ENST00000484087 LAMA4Q16363 1823 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 A0A1W2PRG0 241 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 MINDY4BA8MYZ0 360 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 CXCL11O14625 94 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 ASNSP08243 561 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 DDIT3P35638 169 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 LACTBP83111 547 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-216ENST00000484087 TSGA10IPQ3SY00 556 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 C12orf60Q5U649 245 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 POTEEQ6S8J3 1075 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 C17orf99Q6UX52 265 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 RUFY3Q7L099 469 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 TTC6Q86TZ1 520 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 ZNF589Q86UQ0 364 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-216ENST00000484087 FOXP4Q8IVH2 680 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-216ENST00000484087 ANKRD13CQ8N6S4 541 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 FEZ1Q99689 392 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 EMILIN3Q9NT22 766 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 CTNNA3Q9UI47 895 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 LIMCH1Q9UPQ0 1083 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 AGTPBP1Q9UPW5 1226 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-216ENST00000484087 TACC3Q9Y6A5 838 aa8.15□□□□□ -1.1
BRCA1-216ENST00000484087 A0A0G2JMZ2 1700 aa8.15□□□□□ -1.11
BRCA1-216ENST00000484087 APPP05067 770 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 HMGB1P09429 215 aaKnown RBP8.14□□□□□ -1.11
BRCA1-216ENST00000484087 BCRP11274 1271 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 TDO2P48775 406 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 CDK8P49336 464 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 BACE1P56817 501 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 CUL4AQ13619 759 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 NOL8Q76FK4 1167 aaKnown RBP8.14□□□□□ -1.11
BRCA1-216ENST00000484087 SPICE1Q8N0Z3 855 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 SMCR8Q8TEV9 937 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-216ENST00000484087 SH3TC2Q8TF17 1288 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 ERO1AQ96HE7 468 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 TRIM47Q96LD4 638 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 PARK7Q99497 189 aaKnown RBP8.14□□□□□ -1.11
BRCA1-216ENST00000484087 ASCC2Q9H1I8 757 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-216ENST00000484087 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 TXNRD2Q9NNW7 524 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 SH2B1Q9NRF2 756 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-216ENST00000484087 ATP8A2Q9NTI2 1148 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 GABRQQ9UN88 632 aa8.14□□□□□ -1.11
BRCA1-216ENST00000484087 USP17L10C9JJH3 530 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 VCAM1P19320 739 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 MCM4P33991 863 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 PSMC4P43686 418 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 AK2P54819 239 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 FGD1P98174 961 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 ATP2B2Q01814 1243 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 CTDSPL2Q05D32 466 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 VARS2Q5ST30 1063 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 FBXO46Q6PJ61 603 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 TMEM92Q6UXU6 159 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 C16orf86Q6ZW13 317 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 FASTKD5Q7L8L6 764 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 RASGRP2Q7LDG7 609 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 CERS3Q8IU89 383 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 IFNL3Q8IZI9 196 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 TTC14Q96N46 770 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 NEK1Q96PY6 1258 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 PAGR1Q9BTK6 254 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 MFRPQ9BY79 579 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 AS3MTQ9HBK9 375 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 PTPN22Q9Y2R2 807 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 RBBP6Q7Z6E9 1792 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 ROBO3Q96MS0 1386 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 RAD21O60216 631 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 IGSF3O75054 1194 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 FMNL1O95466 1100 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 HSPD1P10809 573 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 PDIA4P13667 645 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 RASA1P20936 1047 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 OSBPP22059 807 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 RPS6KB1P23443 525 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 ICA1Q05084 483 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 PRKCZQ05513 592 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 IMMTQ16891 758 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 ADCK5Q3MIX3 580 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 FAM47AQ5JRC9 791 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 SIAH1Q8IUQ4 282 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 TNPO1Q92973 898 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 P2RX7Q99572 595 aaKnown RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 WDR18Q9BV38 432 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 ALDH8A1Q9H2A2 487 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-216ENST00000484087 TMOD4Q9NZQ9 345 aa8.13□□□□□ -1.11
BRCA1-216ENST00000484087 ARPP21Q9UBL0 812 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms