RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 A1BGP04217 495 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 CSF1RP07333 972 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 PTPREP23469 700 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 ARHGAP25P42331 645 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 MCAMP43121 646 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 PI16Q6UXB8 463 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 RAD9BQ6WBX8 426 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 CCDC13Q8IYE1 715 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 ZBTB10Q96DT7 871 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 FBXO2Q9UK22 296 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 FOXN1O15353 648 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 PDCLQ13371 301 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 NR1I3Q14994 352 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 ALX1Q15699 326 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 WHAMMP3Q1A5X7 153 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 SPATA20Q8TB22 786 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
SEC61A1-205ENST00000483956 A0A1B0GTH6 734 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 ABL1P00519 1130 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 RXRAP19793 462 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 ERCC5P28715 1186 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 SNX1Q13596 522 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 TUBB2AQ13885 445 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 SNCBQ16143 134 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 KANK3Q6NY19 840 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 TUBB2BQ9BVA1 445 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 NAA15Q9BXJ9 866 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 SENP2Q9HC62 589 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 B4E1Z4 1266 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 MMP1P03956 469 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 IFNAR1P17181 557 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 CDR1P51861 262 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 SPDL1Q96EA4 605 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 SH3GL2Q99962 352 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 MYO5AQ9Y4I1 1855 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 GOLGA6BA6NDN3 693 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 TOB1P50616 345 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 PLCD1P51178 756 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 RWDD2BP57060 319 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 RILPL1Q5EBL4 403 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 SLC9C2Q5TAH2 1124 aa12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 NAPGQ99747 312 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-205ENST00000483956 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 TTC36A6NLP5 189 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 ENO4A6NNW6 628 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 USP14P54578 494 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 ICA1Q05084 483 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 TMEM67Q5HYA8 995 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 ARMC3Q5W041 872 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 MED15Q96RN5 788 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 SELENOOQ9BVL4 669 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 TBC1D2BQ9UPU7 963 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 RIPOR2Q9Y4F9 1068 aa12.96□□□□□ -0.33
SEC61A1-205ENST00000483956 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.34
SEC61A1-205ENST00000483956 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.34
SEC61A1-205ENST00000483956 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.34
SEC61A1-205ENST00000483956 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.34
SEC61A1-205ENST00000483956 NUCKS1Q9H1E3 243 aaKnown RBP12.96□□□□□ -0.34
SEC61A1-205ENST00000483956 POLD4Q9HCU8 107 aa12.96□□□□□ -0.34
SEC61A1-205ENST00000483956 AKR1B15C9JRZ8 316 aaPredicted RBP12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 POLR2DO15514 142 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 ACTN4O43707 911 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 SLC26A6Q9BXS9 759 aa12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 ATP6V0A4Q9HBG4 840 aa12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 SERTAD1Q9UHV2 236 aa12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 APTXQ7Z2E3 356 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 SRPRBQ9Y5M8 271 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 SLC12A7Q9Y666 1083 aa12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 ARAP2Q8WZ64 1704 aa12.95□□□□□ -0.34
SEC61A1-205ENST00000483956 TCRBV5S4A2TA0A5A2 114 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 KCNB1Q14721 858 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 CDCA2Q69YH5 1023 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 PIH1D3Q9NQM4 214 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 TPX2Q9ULW0 747 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 MYO6Q9UM54 1294 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 RPS6KL1Q9Y6S9 549 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms