RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TEX9Q8N6V9 391 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.01
COL4A5-205ENST00000483338 OPTNQ96CV9 577 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 NAF1Q96HR8 494 aaKnown RBP8.71□□□□□ -1.01
COL4A5-205ENST00000483338 DHRS1Q96LJ7 313 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 ATXN10Q9UBB4 475 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 TUBGCP4Q9UGJ1 667 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 SBNO2Q9Y2G9 1366 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 H3BQV1 296 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 STAT6P42226 847 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 IFFO2Q5TF58 517 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 RNF220Q5VTB9 566 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 SAPCD2Q86UD0 394 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 ERICH1Q86X53 443 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 ZIM3Q96PE6 472 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 RUFY1Q96T51 708 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 KCNMB3Q9NPA1 279 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 SRGAP2O75044 1071 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 GHRP10912 638 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 KBTBD12Q3ZCT8 623 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 SMYD1Q8NB12 490 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 NDNQ99608 321 aa8.71□□□□□ -1.02
COL4A5-205ENST00000483338 PIK3C2BO00750 1634 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 ENC1O14682 589 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 GFPT2O94808 682 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 VIL1P09327 827 aaKnown RBP8.7□□□□□ -1.02
COL4A5-205ENST00000483338 KIF5BP33176 963 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 PSMC4P43686 418 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 ZNF268Q14587 947 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-205ENST00000483338 TAF11Q15544 211 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 TRIM68Q6AZZ1 485 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 UBE3BQ7Z3V4 1068 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 HDGFL2Q7Z4V5 671 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-205ENST00000483338 LCA5Q86VQ0 697 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 PANX2Q96RD6 677 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 MTA3Q9BTC8 594 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 SIL1Q9H173 461 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 LNPEPQ9UIQ6 1025 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 KDM6AO15550 1401 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-205ENST00000483338 PLEKHG1Q9ULL1 1385 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 HSF2BPO75031 334 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 VIMP08670 466 aaKnown RBP8.7□□□□□ -1.02
COL4A5-205ENST00000483338 CUL4BQ13620 913 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 TOB2Q14106 344 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-205ENST00000483338 TSNAXIP1Q2TAA8 658 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 TBC1D1Q86TI0 1168 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-205ENST00000483338 CCDC63Q8NA47 563 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 CAPZA3Q96KX2 299 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 NACA2Q9H009 215 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 MYH8P13535 1937 aa8.7□□□□□ -1.02
COL4A5-205ENST00000483338 GMNCA6NCL1 334 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 ZNF233A6NK53 670 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 SMAPO00193 183 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 BACH1O14867 736 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 PENKP01210 267 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 CCNG1P51959 295 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 PPARDQ03181 441 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 APLFQ8IW19 511 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 HDAC7Q8WUI4 952 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 P3H4Q92791 437 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 BRD8Q9H0E9 1235 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 RHBDL2Q9NX52 303 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 WDR37Q9Y2I8 494 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 C3P01024 1663 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 CCND1P24385 295 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 LBRQ14739 615 aaKnown RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 SGSM1Q2NKQ1 1148 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 FOXB2Q5VYV0 432 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 CACNA2D3Q8IZS8 1091 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 PRCCQ92733 491 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 KIFAP3Q92845 792 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 INCENPQ9NQS7 918 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 ADGRB3O60242 1522 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 AOX1Q06278 1338 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 AKR1B15C9JRZ8 316 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 ABLIM1O14639 778 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 MRPS35P82673 323 aaKnown RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 ITGB3BPQ13352 177 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 NECTIN1Q15223 517 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 EZH2Q15910 746 aaKnown RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 PKN1Q16512 942 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 CCDC102BQ68D86 513 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 ADALQ6DHV7 355 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 PPP4R3AQ6IN85 833 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 CCDC155Q8N6L0 562 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 IFT43Q96FT9 208 aa8.69□□□□□ -1.02
COL4A5-205ENST00000483338 CWC25Q9NXE8 425 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 TTF2Q9UNY4 1162 aaKnown RBP8.69□□□□□ -1.02
COL4A5-205ENST00000483338 C5orf60A6NFR6 353 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 PRKAR2BP31323 418 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 FOSBP53539 338 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 CBX3Q13185 183 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 CCDC80Q76M96 950 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 PI4K2BQ8TCG2 481 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 NLRP2Q9NX02 1062 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 SLC12A4Q9UP95 1085 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 GMEB1Q9Y692 573 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms