RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 TTC26A0AVF1 554 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 RASSF9O75901 435 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 EPB41P11171 864 aaKnown RBP13.24□□□□□ -0.29
VTI1A-205ENST00000483122 NF2P35240 595 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 NR5A1Q13285 461 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 LRRC24Q50LG9 513 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
VTI1A-205ENST00000483122 IP6K1Q92551 441 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 STAMQ92783 540 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 EPSTI1Q96J88 318 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
VTI1A-205ENST00000483122 PAX7P23759 505 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 GUCY1A3Q02108 690 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 APBA1Q02410 837 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 CCDC40Q4G0X9 1142 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 WLSQ5T9L3 541 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 SH3RF1Q7Z6J0 888 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 IQCA1Q86XH1 822 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 ZNF473Q8WTR7 871 aaKnown RBP13.23□□□□□ -0.29
VTI1A-205ENST00000483122 SLC40A1Q9NP59 571 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 DUSP10Q9Y6W6 482 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
VTI1A-205ENST00000483122 ZBTB43O43298 467 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 MMP1P03956 469 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 PDHBP11177 359 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 IDEP14735 1019 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 LSP1P33241 339 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 SMTNP53814 917 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
VTI1A-205ENST00000483122 TRIM14Q14142 442 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 TTF1Q15361 905 aaPredicted RBP13.23□□□□□ -0.29
VTI1A-205ENST00000483122 WDR59Q6PJI9 974 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 KIAA1328Q86T90 577 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 SPATS2Q86XZ4 545 aaKnown RBP13.23□□□□□ -0.29
VTI1A-205ENST00000483122 CCDC13Q8IYE1 715 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
VTI1A-205ENST00000483122 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 RUFY1Q96T51 708 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 JADE2Q9NQC1 790 aa13.23□□□□□ -0.29
VTI1A-205ENST00000483122 LRRC10BA6NIK2 292 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 HSF2BPO75031 334 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 GCFC2P16383 781 aaKnown RBP13.22□□□□□ -0.29
VTI1A-205ENST00000483122 SEC24CP53992 1094 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 CASP7P55210 303 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 HDLBPQ00341 1268 aaKnown RBP13.22□□□□□ -0.29
VTI1A-205ENST00000483122 UBXN1Q04323 297 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 SSRP1Q08945 709 aaKnown RBP13.22□□□□□ -0.29
VTI1A-205ENST00000483122 CEP85LQ5SZL2 805 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 LRCH2Q5VUJ6 765 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 PAGR1Q9BTK6 254 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 EPN3Q9H201 632 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 C5P01031 1676 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 COL18A1P39060 1754 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 B4E1Z4 1266 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 GPAA1O43292 621 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 KRT14P02533 472 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.29
VTI1A-205ENST00000483122 FOXO4P98177 505 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 IFT88Q13099 833 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 NNTQ13423 1086 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 TCP11X2Q5H9J9 407 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 MICALCLQ6ZW33 695 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 YTHDF3Q7Z739 585 aaKnown RBP13.22□□□□□ -0.29
VTI1A-205ENST00000483122 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 CREG2Q8IUH2 290 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 OR8K1Q8NGG5 319 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 OXER1Q8TDS5 423 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 SMARCAL1Q9NZC9 954 aa13.22□□□□□ -0.29
VTI1A-205ENST00000483122 KCNJ18B7U540 433 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 NEBLO76041 1014 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
VTI1A-205ENST00000483122 KCNJ12Q14500 433 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 RILPL1Q5EBL4 403 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 ALS2CLQ60I27 953 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 FAM228AQ86W67 206 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 GPR108Q9NPR9 543 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 DDX20Q9UHI6 824 aaKnown RBP13.21□□□□□ -0.29
VTI1A-205ENST00000483122 BCL9LQ86UU0 1499 aa13.21□□□□□ -0.29
VTI1A-205ENST00000483122 MACROD2A1Z1Q3 448 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.3
VTI1A-205ENST00000483122 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.3
VTI1A-205ENST00000483122 PPP1R12AO14974 1030 aaPredicted RBP13.21□□□□□ -0.3
VTI1A-205ENST00000483122 KRT86O43790 486 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 FMNL1O95466 1100 aaPredicted RBP13.21□□□□□ -0.3
VTI1A-205ENST00000483122 EPHB4P54760 987 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 SCARF1Q14162 830 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.3
VTI1A-205ENST00000483122 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 KDM7AQ6ZMT4 941 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 CEP57Q86XR8 500 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms