RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
DDX39B-220ENST00000482195 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
DDX39B-220ENST00000482195 APBB1O00213 710 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 CYBAP13498 195 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 ADORA2AP29274 412 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 DNAJC2Q99543 621 aaKnown RBP12.49□□□□□ -0.41
DDX39B-220ENST00000482195 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
DDX39B-220ENST00000482195 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
DDX39B-220ENST00000482195 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
DDX39B-220ENST00000482195 HOXC6P09630 235 aa12.48□□□□□ -0.41
DDX39B-220ENST00000482195 PDE6AP16499 860 aa12.48□□□□□ -0.41
DDX39B-220ENST00000482195 ERCC3P19447 782 aa12.48□□□□□ -0.41
DDX39B-220ENST00000482195 GUCY1A2P33402 732 aa12.48□□□□□ -0.41
DDX39B-220ENST00000482195 IRX5P78411 483 aaPredicted RBP12.48□□□□□ -0.41
DDX39B-220ENST00000482195 TTF1Q15361 905 aaPredicted RBP12.48□□□□□ -0.41
DDX39B-220ENST00000482195 NCAPG2Q86XI2 1143 aa12.48□□□□□ -0.41
DDX39B-220ENST00000482195 SDR42E1Q8WUS8 393 aa12.48□□□□□ -0.41
DDX39B-220ENST00000482195 RIOK1Q9BRS2 568 aaKnown RBP12.48□□□□□ -0.41
DDX39B-220ENST00000482195 SPATC1LQ9H0A9 340 aa12.48□□□□□ -0.41
DDX39B-220ENST00000482195 LAMA2P24043 3122 aaKnown RBP12.48□□□□□ -0.41
DDX39B-220ENST00000482195 DPYSL4O14531 572 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 RAD21O60216 631 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 FLOT1O75955 427 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 CYP2D6P10635 497 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 RLBP1P12271 317 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 FOXK1P85037 733 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 OLFML2BQ68BL8 750 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 CEP85Q6P2H3 762 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 CLEC10AQ8IUN9 316 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.47□□□□□ -0.413e-66■□□□□ 9.6
DDX39B-220ENST00000482195 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 ARRDC4Q8NCT1 418 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
DDX39B-220ENST00000482195 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
DDX39B-220ENST00000482195 ZNF532Q9HCE3 1301 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 A0A1W2PRG0 241 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 HAX1O00165 279 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 GOLIM4O00461 696 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 ICA1Q05084 483 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 COG2Q14746 738 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 TRIM60Q495X7 471 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-220ENST00000482195 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 LCORLQ8N3X6 602 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 FERMT2Q96AC1 680 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 ATG4CQ96DT6 458 aa12.46□□□□□ -0.41
DDX39B-220ENST00000482195 SEPT4O43236 478 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-220ENST00000482195 STRNO43815 780 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 COBLO75128 1261 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 IFIT2P09913 472 aaKnown RBP12.45□□□□□ -0.42
DDX39B-220ENST00000482195 HNRNPUQ00839 825 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX39B-220ENST00000482195 GABPAQ06546 454 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 PRAMEF19Q5SWL8 479 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 SLC39A5Q6ZMH5 540 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 MB21D1Q8N884 522 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 SHCBP1Q8NEM2 672 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 DYNLL2Q96FJ2 89 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 ARMT1Q9H993 441 aa12.45□□□□□ -0.42
DDX39B-220ENST00000482195 CDH23Q9H251 3354 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 AKR1B1P15121 316 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 ADCYAP1R1P41586 468 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 SHHQ15465 462 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 HSP90AB4PQ58FF6 505 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 FAM47AQ5JRC9 791 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 KIAA1755Q5JYT7 1200 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 C9orf50Q5SZB4 431 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 FAM109BQ6ICB4 259 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-220ENST00000482195 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 TMC2Q8TDI7 906 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 BADQ92934 168 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 COL25A1Q9BXS0 654 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-220ENST00000482195 MROH8Q9H579 483 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 OCEL1Q9H607 264 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 DCP1AQ9NPI6 582 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-220ENST00000482195 PDLIM7Q9NR12 457 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 MYH4Q9Y623 1939 aa12.44□□□□□ -0.42
DDX39B-220ENST00000482195 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 MBD4O95243 580 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 FCER1AP12319 257 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 LRRC41Q15345 812 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
DDX39B-220ENST00000482195 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
DDX39B-220ENST00000482195 PANK1Q8TE04 598 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 MAML3Q96JK9 1138 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 MMP19Q99542 508 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 EYSQ5T1H1 3165 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms