RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 NPY5RQ15761 445 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 AXDND1Q5T1B0 1012 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-205ENST00000482013 ENGASEQ8NFI3 743 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 TNMDQ9H2S6 317 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 SPON1Q9HCB6 807 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 CABP5Q9NP86 173 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 BARHL2Q9NY43 387 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 PPP1R1BQ9UD71 204 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-205ENST00000482013 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 MPHOSPH10O00566 681 aaKnown RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 CYTH3O43739 400 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 NR1I2O75469 434 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 TNNI2P48788 182 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 TOB1P50616 345 aaPredicted RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 ABCB5Q2M3G0 1257 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 UVSSAQ2YD98 709 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 BLIDQ8IZY5 108 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 FSIP1Q8NA03 581 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 DCAF4Q8WV16 495 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 FUCA2Q9BTY2 467 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 SEC63Q9UGP8 760 aaKnown RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 PCDHA4Q9UN74 947 aa13.43□□□□□ -0.26
GGPS1-205ENST00000482013 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
GGPS1-205ENST00000482013 BAZ2BQ9UIF8 2168 aaKnown RBP13.42□□□□□ -0.26
GGPS1-205ENST00000482013 hCG_1642624A0A1W2PR95 340 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 TRIM75PA6NK02 468 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 USP17L5A8MUK1 530 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 STXBP3O00186 592 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 CCDC192P0DO97 292 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 MAP3K10Q02779 954 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 NR5A1Q13285 461 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 SNW1Q13573 536 aaKnown RBP13.42□□□□□ -0.26
GGPS1-205ENST00000482013 SLC35G1Q2M3R5 365 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 USP17L2Q6R6M4 530 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 FMR1NBQ8N0W7 255 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-205ENST00000482013 KRI1Q8N9T8 703 aaKnown RBP13.42□□□□□ -0.26
GGPS1-205ENST00000482013 TIGD1Q96MW7 591 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 RBSNQ9H1K0 784 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.42□□□□□ -0.26
GGPS1-205ENST00000482013 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 CNTNAP1P78357 1384 aa13.42□□□□□ -0.26
GGPS1-205ENST00000482013 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
GGPS1-205ENST00000482013 M0R2N6 131 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
GGPS1-205ENST00000482013 CAVIN2O95810 425 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 PTPREP23469 700 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 GNA11P29992 359 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 TNFAIP1Q13829 316 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 WWC2Q6AWC2 1192 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 ELOA2Q8IYF1 753 aaPredicted RBP13.41□□□□□ -0.26
GGPS1-205ENST00000482013 GMCL1P1Q8NEA9 526 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 ANP32BQ92688 251 aaKnown RBP13.41□□□□□ -0.26
GGPS1-205ENST00000482013 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 GOLPH3LQ9H4A5 285 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 C6orf50Q9HD87 102 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 GINM1Q9NU53 330 aa13.41□□□□□ -0.26
GGPS1-205ENST00000482013 SRPRBQ9Y5M8 271 aaKnown RBP13.41□□□□□ -0.26
GGPS1-205ENST00000482013 PNMA6FA0A0J9YX94 578 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 WNT10BO00744 389 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 GOLGA8HP0CJ92 632 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 EEF2P13639 858 aaKnown RBP13.4□□□□□ -0.26
GGPS1-205ENST00000482013 ICA1Q05084 483 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 RESP18Q5W5W9 173 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 PPP1R18Q6NYC8 613 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 PCDHB6Q9Y5E3 794 aa13.4□□□□□ -0.26
GGPS1-205ENST00000482013 MARCKSP29966 332 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-205ENST00000482013 SEPT2Q15019 361 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 TTC38Q5R3I4 469 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 KRT25Q7Z3Z0 450 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 HEATR3Q7Z4Q2 680 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 SIAH1Q8IUQ4 282 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 LRRC47Q8N1G4 583 aaKnown RBP13.39□□□□□ -0.27
GGPS1-205ENST00000482013 GMCL1Q96IK5 515 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 GLT8D2Q9H1C3 349 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 PGAP2Q9UHJ9 254 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 FBXO2Q9UK22 296 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-205ENST00000482013 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 HPSEQ9Y251 543 aa13.39□□□□□ -0.27
GGPS1-205ENST00000482013 ZNF202O95125 648 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 VEGFAP15692 232 aaPredicted RBP13.38□□□□□ -0.27
GGPS1-205ENST00000482013 PFKFB1P16118 471 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 NDUFA8P51970 172 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 NAPAP54920 295 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
GGPS1-205ENST00000482013 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms