RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 LHX8Q68G74 356 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 DPP9Q86TI2 863 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 CLEC10AQ8IUN9 316 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 SPICE1Q8N0Z3 855 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 ATG4CQ96DT6 458 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 PPP1R9AQ9ULJ8 1098 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 SMIM22K7EJ46 135 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 SLC3A2P08195 630 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 PPP4R3BQ5MIZ7 849 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 RIOX2Q8IUF8 465 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 IFNL3Q8IZI9 196 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 FSD1Q9BTV5 496 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 EPB41L4AQ9HCS5 686 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 FLRT1Q9NZU1 646 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 RBM27Q9P2N5 1060 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 DDX20Q9UHI6 824 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 NRBP1Q9UHY1 535 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 LAMA3Q16787 3333 aa14.48□□□□□ -0.09
SQSTM1-207ENST00000481335 PFASO15067 1338 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 IGKV6D-41A0A0C4DH26 115 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 MINDY4BA8MYZ0 360 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 M0R2C6 588 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 VWA5AO00534 786 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 FCER1AP12319 257 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 CYBAP13498 195 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 PDE4BQ07343 736 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 PLS1Q14651 629 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 ZMYM1Q5SVZ6 1142 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 NCAPG2Q86XI2 1143 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 ZNF444Q8N0Y2 327 aaPredicted RBP14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 NPLOC4Q8TAT6 608 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 MKL1Q969V6 931 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 DIS3Q9Y2L1 958 aaKnown RBP14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 SZT2Q5T011 3432 aa14.47□□□□□ -0.09
SQSTM1-207ENST00000481335 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 DNM1LO00429 736 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 APPP05067 770 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 BMP8BP34820 402 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 TMEM132BQ14DG7 1078 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 EVI5LQ96CN4 794 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 NAPBQ9H115 298 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 STAP2Q9UGK3 403 aa14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 ZNF214Q9UL59 606 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-207ENST00000481335 F5H6K3 240 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 ATP2A1O14983 1001 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 TTLL1O95922 423 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 FDX1P10109 184 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 KLRC3Q07444 240 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 FAM83BQ5T0W9 1011 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 GMCL1P1Q8NEA9 526 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 REPS2Q8NFH8 660 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 MAML3Q96JK9 1138 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 SLF1Q9BQI6 1058 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 TEX13BQ9BXU2 312 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 MTMR4Q9NYA4 1195 aa14.45□□□□□ -0.1
SQSTM1-207ENST00000481335 SEPT4O43236 478 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 NDUFB10O96000 172 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 TSPY3P0CV98 308 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 TSPY8P0CW00 308 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 CNGA1P29973 690 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 CYP2C19P33261 490 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 STAT3P40763 770 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 KCTD2Q14681 263 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 ANKRD45Q5TZF3 282 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.44□□□□□ -0.11e-6■■□□□ 14.4
SQSTM1-207ENST00000481335 C7orf61Q8IZ16 206 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 MSL3Q8N5Y2 521 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 PRPF38AQ8NAV1 312 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 ARRDC4Q8NCT1 418 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 NEDD1Q8NHV4 660 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 OTUD7AQ8TE49 926 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 CRBNQ96SW2 442 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 MMP19Q99542 508 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 GDF15Q99988 308 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 FBXO28Q9NVF7 368 aa14.44□□□□□ -0.1
SQSTM1-207ENST00000481335 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 RAD21O60216 631 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 COBLO75128 1261 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 OAZ1P54368 228 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 PPARAQ07869 468 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 CEP95Q96GE4 821 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 HELLSQ9NRZ9 838 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 FEM1BQ9UK73 627 aa14.43□□□□□ -0.1
SQSTM1-207ENST00000481335 ZMYM6O95789 1325 aa14.42□□□□□ -0.1
SQSTM1-207ENST00000481335 PDE1AP54750 535 aa14.42□□□□□ -0.1
SQSTM1-207ENST00000481335 TRPV1Q8NER1 839 aa14.42□□□□□ -0.1
SQSTM1-207ENST00000481335 SEC62Q99442 399 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-207ENST00000481335 CLIP2Q9UDT6 1046 aa14.42□□□□□ -0.1
SQSTM1-207ENST00000481335 ANAPC4Q9UJX5 808 aa14.42□□□□□ -0.1
SQSTM1-207ENST00000481335 ZBED4O75132 1171 aa14.41□□□□□ -0.1
SQSTM1-207ENST00000481335 PRDM1O75626 825 aa14.41□□□□□ -0.1
SQSTM1-207ENST00000481335 ZNF792Q3KQV3 632 aa14.41□□□□□ -0.1
SQSTM1-207ENST00000481335 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-207ENST00000481335 SLC38A10Q9HBR0 1119 aa14.41□□□□□ -0.1
SQSTM1-207ENST00000481335 FBXO40Q9UH90 709 aa14.41□□□□□ -0.1
SQSTM1-207ENST00000481335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.41□□□□□ -0.15e-7■■■□□ 16.2
SQSTM1-207ENST00000481335 CTDP1Q9Y5B0 961 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-207ENST00000481335 KBTBD13C9JR72 458 aa14.4□□□□□ -0.1
SQSTM1-207ENST00000481335 PLA2G6O60733 806 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms