RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
RAPGEF1-207ENST00000481260 REPS2Q8NFH8 660 aa13.54□□□□□ -0.24
RAPGEF1-207ENST00000481260 LPAR1Q92633 364 aa13.54□□□□□ -0.24
RAPGEF1-207ENST00000481260 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-207ENST00000481260 MTMR7Q9Y216 660 aa13.54□□□□□ -0.24
RAPGEF1-207ENST00000481260 PARP14Q460N5 1801 aa13.54□□□□□ -0.24
RAPGEF1-207ENST00000481260 ORC4O43929 436 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 TTLL1O95922 423 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 SNAP25P60880 206 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 PLS1Q14651 629 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 MKL1Q969V6 931 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 SPATC1LQ9H0A9 340 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 GOPCQ9HD26 462 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 TOMM22Q9NS69 142 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 ADAMTS5Q9UNA0 930 aa13.53□□□□□ -0.24
RAPGEF1-207ENST00000481260 TSPY2A6NKD2 308 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 VWA5AO00534 786 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 SLC3A2P08195 630 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 ERCC3P19447 782 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 MAPK4P31152 587 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 SLFN13Q68D06 897 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 NBPF11Q86T75 865 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 HOXC10Q9NYD6 342 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 RIPK3Q9Y572 518 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 ZMYM6O95789 1325 aa13.52□□□□□ -0.25
RAPGEF1-207ENST00000481260 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 COBLO75128 1261 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 PTPREP23469 700 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 MCCP23508 829 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 NOVP48745 357 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 COL9A3Q14050 684 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 AKNAD1Q5T1N1 836 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 RCSD1Q6JBY9 416 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 TICAM2Q86XR7 235 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 GTF3C2Q8WUA4 911 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 ZNF214Q9UL59 606 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 STX8Q9UNK0 236 aa13.51□□□□□ -0.25
RAPGEF1-207ENST00000481260 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 B4E1Z4 1266 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 GRB14Q14449 540 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 TTBK2Q6IQ55 1244 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 NCAPG2Q86XI2 1143 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 GMCL1P1Q8NEA9 526 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 PXYLP1Q8TE99 480 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 DEFB118Q96PH6 123 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 NUDT12Q9BQG2 462 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 SLF1Q9BQI6 1058 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 TMEM47Q9BQJ4 181 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 DSCC1Q9BVC3 393 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 ZNF287Q9HBT7 754 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 RBBP6Q7Z6E9 1792 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-207ENST00000481260 PDE4DIPQ5VU43 2346 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 HIP1O00291 1037 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 HMGCRP04035 888 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 PGK2P07205 417 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 ADORA2AP29274 412 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 SLC4A3P48751 1232 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 CACNB2Q08289 660 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 RAVER2Q9HCJ3 691 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-207ENST00000481260 LAMA4Q16363 1823 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 FRMPD2Q68DX3 1309 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 SLC15A5A6NIM6 579 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 TMEM232C9JQI7 657 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 ZNF213O14771 459 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 SGSM2O43147 1006 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 KDM4AO75164 1064 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 IGHA2P01877 340 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 BMP3P12645 472 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 CYP2C19P33261 490 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 SLC16A2P36021 539 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 RGS2P41220 211 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 CCNA1P78396 465 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 CYB5R4Q7L1T6 521 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 CPXCR1Q8N123 301 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 DIS3LQ8TF46 1054 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 U2AF1L4Q8WU68 220 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 SOCS4Q8WXH5 440 aa13.48□□□□□ -0.25
RAPGEF1-207ENST00000481260 APBA2Q99767 749 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms