RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 RRP36Q96EU6 259 aaKnown RBP17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 hCG_1984214I3L0E3 225 aa17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 CYTH3O43739 400 aa17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 MMP1P03956 469 aa17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 GOLGA8HP0CJ92 632 aa17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 SLC1A4P43007 532 aa17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 KRT85P78386 507 aa17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 KIF23Q02241 960 aaPredicted RBP17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 ZNF713Q8N859 430 aaPredicted RBP17.09■□□□□ 0.33
SNRNP200-205ENST00000480835 FRMPD2Q68DX3 1309 aaPredicted RBP17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 A0A1W2PRG0 241 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 NDUFB10O96000 172 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 NOL9Q5SY16 702 aaKnown RBP17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 OTUD7BQ6GQQ9 843 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 KRT26Q7Z3Y9 468 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 SCYL3Q8IZE3 742 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 KLRG1Q96E93 195 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 VCPKMTQ9H867 229 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 SEC63Q9UGP8 760 aaKnown RBP17.08■□□□□ 0.32
SNRNP200-205ENST00000480835 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 POTECB2RU33 542 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 UBE2Q2LH0YL09 131 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 NF2P35240 595 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 GNL2Q13823 731 aaKnown RBP17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 SLC35G1Q2M3R5 365 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 RASGRP2Q7LDG7 609 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 CCDC148Q8NFR7 591 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 ACER1Q8TDN7 264 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 PHF20Q9BVI0 1012 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 FOXP1Q9H334 677 aaPredicted RBP17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
SNRNP200-205ENST00000480835 hCG_1642624A0A1W2PR95 340 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 BMP3P12645 472 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 CALML3P27482 149 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 INPP5BP32019 993 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 ECE1P42892 770 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 DNM1Q05193 864 aaKnown RBP17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 GALNT17Q6IS24 598 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 WDR18Q9BV38 432 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 SCAND2PQ9GZW5 306 aaPredicted RBP17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 AS3MTQ9HBK9 375 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 PICK1Q9NRD5 415 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 GJB4Q9NTQ9 266 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 VPS54Q9P1Q0 977 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 CFAP45Q9UL16 551 aa17.06■□□□□ 0.32
SNRNP200-205ENST00000480835 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 RAD21O60216 631 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 PPP1R12BO60237 982 aaPredicted RBP17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 NBR1Q14596 966 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 BTNL9Q6UXG8 535 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 KCTD1Q719H9 257 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 DIS3L2Q8IYB7 885 aaKnown RBP17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 ADGRF4Q8IZF3 695 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 MTMR8Q96EF0 704 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 FEZ1Q99689 392 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 BARHL2Q9NY43 387 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 PHIPQ8WWQ0 1821 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 PAPPA2Q9BXP8 1791 aa17.05■□□□□ 0.32
SNRNP200-205ENST00000480835 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 PLA2G6O60733 806 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 USP2O75604 605 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 KRT2P35908 639 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 USP14P54578 494 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 NLRP5P59047 1200 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 SKOR2Q2VWA4 1001 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 FOXD4L6Q3SYB3 417 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 FOXD4L3Q6VB84 417 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 LPAR1Q92633 364 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 PIGSQ96S52 555 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 JMJD4Q9H9V9 463 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
SNRNP200-205ENST00000480835 ELP1O95163 1332 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 OTOFQ9HC10 1997 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 KIF28PB7ZC32 967 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 STXBP3O00186 592 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 PTPRAP18433 802 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 MAP3K9P80192 1104 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 SYDE2Q5VT97 1194 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms