RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 PAWRQ96IZ0 340 aaKnown RBP17.75■□□□□ 0.43
LIMS4-202ENST00000480598 HTATIP2Q9BUP3 242 aa17.75■□□□□ 0.43
LIMS4-202ENST00000480598 ZNF287Q9HBT7 754 aa17.75■□□□□ 0.43
LIMS4-202ENST00000480598 MYH4Q9Y623 1939 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 A0A0D9SFI3 127 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 NDUFB10O96000 172 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 HOXC6P09630 235 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 NCAPG2Q86XI2 1143 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 SHCBP1Q8NEM2 672 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 FAM227BQ96M60 508 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 PPP1R9AQ9ULJ8 1098 aa17.74■□□□□ 0.43
LIMS4-202ENST00000480598 ZNF236Q9UL36 1845 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 TRIM6-TRIM34B2RNG4 842 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 F5H6K3 240 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 SLC34A2O95436 690 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 CAPN2P17655 700 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 ADORA2AP29274 412 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 CTDSPL2Q05D32 466 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 PDE4BQ07343 736 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 KLRC3Q07444 240 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 LRRC47Q8N1G4 583 aaKnown RBP17.73■□□□□ 0.43
LIMS4-202ENST00000480598 INCENPQ9NQS7 918 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 HELLSQ9NRZ9 838 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 MTMR4Q9NYA4 1195 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 ADAMTS5Q9UNA0 930 aa17.73■□□□□ 0.43
LIMS4-202ENST00000480598 PLIN4Q96Q06 1357 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 VWA5AO00534 786 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 SLC3A2P08195 630 aaKnown RBP17.72■□□□□ 0.43
LIMS4-202ENST00000480598 TSPY3P0CV98 308 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 TSPY8P0CW00 308 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 MNX1P50219 401 aaPredicted RBP17.72■□□□□ 0.43
LIMS4-202ENST00000480598 TFAP4Q01664 338 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 NUCB1Q02818 461 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 MFSD14CQ5VZR4 134 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 DPP9Q86TI2 863 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 NEDD1Q8NHV4 660 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 RILPL2Q969X0 211 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 MROH8Q9H579 483 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 OGDHLQ9ULD0 1010 aa17.72■□□□□ 0.43
LIMS4-202ENST00000480598 ALPK3Q96L96 1907 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 STRNO43815 780 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 COBLO75128 1261 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 CYP2C19P33261 490 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 NMIQ13287 307 aaPredicted RBP17.71■□□□□ 0.43
LIMS4-202ENST00000480598 NECAB2Q7Z6G3 386 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 ZNF589Q86UQ0 364 aaPredicted RBP17.71■□□□□ 0.43
LIMS4-202ENST00000480598 PLEKHM2Q8IWE5 1019 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 ANKLE1Q8NAG6 615 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 REPS2Q8NFH8 660 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 SLF1Q9BQI6 1058 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
LIMS4-202ENST00000480598 TACC3Q9Y6A5 838 aa17.71■□□□□ 0.43
LIMS4-202ENST00000480598 TTLL1O95922 423 aa17.7■□□□□ 0.42
LIMS4-202ENST00000480598 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
LIMS4-202ENST00000480598 HABP4Q5JVS0 413 aaKnown RBP17.7■□□□□ 0.42
LIMS4-202ENST00000480598 LHX8Q68G74 356 aa17.7■□□□□ 0.42
LIMS4-202ENST00000480598 RIOX2Q8IUF8 465 aa17.7■□□□□ 0.42
LIMS4-202ENST00000480598 MKL1Q969V6 931 aa17.7■□□□□ 0.42
LIMS4-202ENST00000480598 ZNF214Q9UL59 606 aaPredicted RBP17.7■□□□□ 0.42
LIMS4-202ENST00000480598 SLC25A27O95847 323 aa17.69■□□□□ 0.42
LIMS4-202ENST00000480598 IGHA2P01877 340 aa17.69■□□□□ 0.42
LIMS4-202ENST00000480598 STAT3P40763 770 aa17.69■□□□□ 0.42
LIMS4-202ENST00000480598 IRX6P78412 446 aaPredicted RBP17.69■□□□□ 0.42
LIMS4-202ENST00000480598 TRPV1Q8NER1 839 aa17.69■□□□□ 0.42
LIMS4-202ENST00000480598 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
LIMS4-202ENST00000480598 NBPF3Q9H094 633 aa17.69■□□□□ 0.42
LIMS4-202ENST00000480598 COLQQ9Y215 455 aaPredicted RBP17.69■□□□□ 0.42
LIMS4-202ENST00000480598 FRMPD3Q5JV73 1810 aa17.69■□□□□ 0.42
LIMS4-202ENST00000480598 ZNFX1Q9P2E3 1918 aaKnown RBP17.68■□□□□ 0.42
LIMS4-202ENST00000480598 EVI5O60447 810 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 FGAP02671 866 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 FCER1AP12319 257 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 CNGA1P29973 690 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 ALX1Q15699 326 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 OLFML2BQ68BL8 750 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 SLFN13Q68D06 897 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 ABRAQ8N0Z2 381 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 MMP19Q99542 508 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 C11orf49Q9H6J7 331 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 ANAPC4Q9UJX5 808 aa17.68■□□□□ 0.42
LIMS4-202ENST00000480598 TSPY2A6NKD2 308 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 NMT2O60551 498 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
LIMS4-202ENST00000480598 CYBAP13498 195 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 GMCL1P1Q8NEA9 526 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 KIFC2Q96AC6 838 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 DDX20Q9UHI6 824 aaKnown RBP17.67■□□□□ 0.42
LIMS4-202ENST00000480598 SYNPO2Q9UMS6 1093 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 NR2E3Q9Y5X4 410 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 PFASO15067 1338 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 CCDC171Q6TFL3 1326 aa17.67■□□□□ 0.42
LIMS4-202ENST00000480598 RANBP6O60518 1105 aaKnown RBP17.66■□□□□ 0.42
LIMS4-202ENST00000480598 PGK2P07205 417 aa17.66■□□□□ 0.42
LIMS4-202ENST00000480598 SDSP20132 328 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms