RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 CLIP2Q9UDT6 1046 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 NOL7Q9UMY1 257 aaKnown RBP12.67□□□□□ -0.38
VTI1A-204ENST00000480057 PCDHA7Q9UN72 937 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-204ENST00000480057 CNTNAP1P78357 1384 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 FAM237AA0A1B0GTK4 181 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 ESYT2A0FGR8 921 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
VTI1A-204ENST00000480057 CYTH3O43739 400 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 NLRP5P59047 1200 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 FAM160A1Q05DH4 1040 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 NPY5RQ15761 445 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 ABCB5Q2M3G0 1257 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 RBM43Q6ZSC3 357 aaKnown RBP12.66□□□□□ -0.38
VTI1A-204ENST00000480057 CCAR1Q8IX12 1150 aaKnown RBP12.66□□□□□ -0.38
VTI1A-204ENST00000480057 GMCL1P1Q8NEA9 526 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 DCAF4Q8WV16 495 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 MRPS27Q92552 414 aaKnown RBP12.66□□□□□ -0.38
VTI1A-204ENST00000480057 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 CSRNP1Q96S65 589 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 TSPY26PQ9H489 355 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 PCDHA4Q9UN74 947 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
VTI1A-204ENST00000480057 WNT10BO00744 389 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 CUTAO60888 179 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 CMA1P23946 247 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 TOB1P50616 345 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-204ENST00000480057 ZNF543Q08ER8 600 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 TNFAIP1Q13829 316 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 SLC35G1Q2M3R5 365 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
VTI1A-204ENST00000480057 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 USP17L2Q6R6M4 530 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 BLIDQ8IZY5 108 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
VTI1A-204ENST00000480057 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
VTI1A-204ENST00000480057 ENGASEQ8NFI3 743 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 GINM1Q9NU53 330 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 DACT1Q9NYF0 836 aa12.65□□□□□ -0.38
VTI1A-204ENST00000480057 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
VTI1A-204ENST00000480057 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
VTI1A-204ENST00000480057 TRIM75PA6NK02 468 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 TCP10L2B9ZVM9 353 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 STXBP3O00186 592 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 ICA1Q05084 483 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 NR5A1Q13285 461 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-204ENST00000480057 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 FSIP1Q8NA03 581 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 GMCL1Q96IK5 515 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 FUCA2Q9BTY2 467 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 ZMYND12Q9H0C1 365 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.39
VTI1A-204ENST00000480057 PGAP2Q9UHJ9 254 aa12.64□□□□□ -0.39
VTI1A-204ENST00000480057 hCG_1642624A0A1W2PR95 340 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 CLRN2A0PK11 232 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 M0R2N6 131 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 KINO60870 393 aaKnown RBP12.63□□□□□ -0.39
VTI1A-204ENST00000480057 NR1I2O75469 434 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 XRCC6P12956 609 aaKnown RBP eCLIP12.63□□□□□ -0.39
VTI1A-204ENST00000480057 EEF2P13639 858 aaKnown RBP12.63□□□□□ -0.39
VTI1A-204ENST00000480057 GNA11P29992 359 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 RASSF7Q02833 373 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 SNW1Q13573 536 aaKnown RBP12.63□□□□□ -0.39
VTI1A-204ENST00000480057 TEX2Q8IWB9 1127 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
VTI1A-204ENST00000480057 MTMR8Q96EF0 704 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 TNMDQ9H2S6 317 aa12.63□□□□□ -0.39
VTI1A-204ENST00000480057 CAVIN2O95810 425 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 CCDC192P0DO97 292 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 LMNB1P20700 586 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 PTPREP23469 700 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 GMPSP49915 693 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-204ENST00000480057 ORC2Q13416 577 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-204ENST00000480057 SEPT2Q15019 361 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 UVSSAQ2YD98 709 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 SIAH1Q8IUQ4 282 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 ELOA2Q8IYF1 753 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-204ENST00000480057 FMR1NBQ8N0W7 255 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-204ENST00000480057 GOLPH3LQ9H4A5 285 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 VEZTQ9HBM0 779 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 C6orf50Q9HD87 102 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 HPSEQ9Y251 543 aa12.62□□□□□ -0.39
VTI1A-204ENST00000480057 SRPRBQ9Y5M8 271 aaKnown RBP12.62□□□□□ -0.39
VTI1A-204ENST00000480057 PNMA6FA0A0J9YX94 578 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 GH2P01242 217 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 PRELPP51888 382 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 NAPAP54920 295 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 TTC38Q5R3I4 469 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms