RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 MAGEB6Q8N7X4 407 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 MAFAQ8NHW3 353 aaPredicted RBP12.57□□□□□ -0.4
SMURF1-204ENST00000480055 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
SMURF1-204ENST00000480055 C1orf115Q9H7X2 142 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 CABP5Q9NP86 173 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 PRKAG2Q9UGJ0 569 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 IVNS1ABPQ9Y6Y0 642 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 GBF1Q92538 1859 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 IGSF3O75054 1194 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 SHHQ15465 462 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 TTC6Q86TZ1 520 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
SMURF1-204ENST00000480055 TRPV1Q8NER1 839 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 ZNF512BQ96KM6 892 aaPredicted RBP12.56□□□□□ -0.4
SMURF1-204ENST00000480055 SERPINB13Q9UIV8 391 aa12.56□□□□□ -0.4
SMURF1-204ENST00000480055 BAZ2AQ9UIF9 1905 aaKnown RBP12.55□□□□□ -0.4
SMURF1-204ENST00000480055 MYO9BQ13459 2157 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
SMURF1-204ENST00000480055 VCAM1P19320 739 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 CYP2C19P33261 490 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 SMAD3P84022 425 aaKnown RBP12.55□□□□□ -0.4
SMURF1-204ENST00000480055 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 SNX17Q15036 470 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 TATDN1Q6P1N9 297 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 ITPRIPQ8IWB1 547 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 NPLOC4Q8TAT6 608 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 DDX12PQ92771 950 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 SEMA6BQ9H3T3 888 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
SMURF1-204ENST00000480055 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
SMURF1-204ENST00000480055 ATP11BQ9Y2G3 1177 aa12.55□□□□□ -0.4
SMURF1-204ENST00000480055 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
SMURF1-204ENST00000480055 GJC2Q5T442 439 aaPredicted RBP12.54□□□□□ -0.4
SMURF1-204ENST00000480055 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 DPP9Q86TI2 863 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 MYLIPQ8WY64 445 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 KIAA1683Q9H0B3 1180 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 EHD4Q9H223 541 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 TTYH1Q9H313 450 aaPredicted RBP12.54□□□□□ -0.4
SMURF1-204ENST00000480055 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
SMURF1-204ENST00000480055 PDLIM7Q9NR12 457 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 MYH7P12883 1935 aa12.54□□□□□ -0.4
SMURF1-204ENST00000480055 KBTBD13C9JR72 458 aa12.53□□□□□ -0.4
SMURF1-204ENST00000480055 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
SMURF1-204ENST00000480055 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
SMURF1-204ENST00000480055 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
SMURF1-204ENST00000480055 ZNF454Q8N9F8 522 aa12.53□□□□□ -0.4
SMURF1-204ENST00000480055 ARRDC4Q8NCT1 418 aa12.53□□□□□ -0.4
SMURF1-204ENST00000480055 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
SMURF1-204ENST00000480055 EAF2Q96CJ1 260 aaPredicted RBP12.53□□□□□ -0.4
SMURF1-204ENST00000480055 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
SMURF1-204ENST00000480055 MCM3APO60318 1980 aa12.52□□□□□ -0.4
SMURF1-204ENST00000480055 NCOR1O75376 2440 aa12.52□□□□□ -0.4
SMURF1-204ENST00000480055 TMEM265A0A087WTH1 108 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 MAGEB6P1A0A0J9YX57 407 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
SMURF1-204ENST00000480055 TRIM60Q495X7 471 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 C1orf53Q5VUE5 145 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 AACSQ86V21 672 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 BADQ92934 168 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 TANGO6Q9C0B7 1094 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 ANTXR1Q9H6X2 564 aa12.52□□□□□ -0.41
SMURF1-204ENST00000480055 PRDM5Q9NQX1 630 aaPredicted RBP12.52□□□□□ -0.41
SMURF1-204ENST00000480055 NOP58Q9Y2X3 529 aaKnown RBP12.52□□□□□ -0.41
SMURF1-204ENST00000480055 SEPT4O43236 478 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 FOSL2P15408 326 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 ADORA2AP29274 412 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 SHMT1P34896 483 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 PLCD1P51178 756 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 PLS1Q14651 629 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 SEPT2Q15019 361 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 VARS2Q5ST30 1063 aaKnown RBP12.51□□□□□ -0.41
SMURF1-204ENST00000480055 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 MCM9Q9NXL9 1143 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 HOXC10Q9NYD6 342 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 MUC3AQ02505 3323 aa12.51□□□□□ -0.41
SMURF1-204ENST00000480055 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 STRNO43815 780 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 COG2Q14746 738 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 TTF1Q15361 905 aaPredicted RBP12.5□□□□□ -0.41
SMURF1-204ENST00000480055 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
SMURF1-204ENST00000480055 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
SMURF1-204ENST00000480055 MOV10L1Q9BXT6 1211 aaKnown RBP12.5□□□□□ -0.41
SMURF1-204ENST00000480055 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
SMURF1-204ENST00000480055 SLC5A4Q9NY91 659 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 EXOC6BQ9Y2D4 811 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms