RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TRAPPC10P48553 1259 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 PICALMQ13492 652 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 SMARCE1Q969G3 411 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 ZC3H12CQ9C0D7 883 aaKnown RBP14.84□□□□□ -0.03
SEC13-216ENST00000479868 PCDHA4Q9UN74 947 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 MORC3Q14149 939 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 DOK7Q18PE1 504 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 KANK3Q6NY19 840 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 SPATA20Q8TB22 786 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 CEP95Q96GE4 821 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 ADAMTSL1Q8N6G6 1762 aa14.83□□□□□ -0.03
SEC13-216ENST00000479868 KLRF2D3W0D1 207 aa14.83□□□□□ -0.03
SEC13-216ENST00000479868 M0R2N6 131 aa14.83□□□□□ -0.03
SEC13-216ENST00000479868 CCZ1BP86790 482 aa14.83□□□□□ -0.03
SEC13-216ENST00000479868 CCZ1P86791 482 aaPredicted RBP14.83□□□□□ -0.03
SEC13-216ENST00000479868 IL17AQ16552 155 aa14.83□□□□□ -0.03
SEC13-216ENST00000479868 DPP8Q6V1X1 898 aaPredicted RBP14.83□□□□□ -0.03
SEC13-216ENST00000479868 OSBPL5Q9H0X9 879 aaPredicted RBP14.83□□□□□ -0.03
SEC13-216ENST00000479868 FANCLQ9NW38 375 aa14.83□□□□□ -0.03
SEC13-216ENST00000479868 QSER1Q2KHR3 1735 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 NEMFO60524 1076 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 SLFN14P0C7P3 912 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 HMGB2P26583 209 aaKnown RBP14.83□□□□□ -0.04
SEC13-216ENST00000479868 AFMP43652 599 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 MSL1Q68DK7 614 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 TMC6Q7Z403 805 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 HEATR3Q7Z4Q2 680 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 DPF2Q92785 391 aa14.83□□□□□ -0.04
SEC13-216ENST00000479868 DDX4Q9NQI0 724 aaKnown RBP14.83□□□□□ -0.04
SEC13-216ENST00000479868 TTF2Q9UNY4 1162 aaKnown RBP14.83□□□□□ -0.04
SEC13-216ENST00000479868 STXBP3O00186 592 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 SKILP12757 684 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 CASP1P29466 404 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 ALDH1B1P30837 517 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 FMR1Q06787 632 aaKnown RBP eCLIP14.82□□□□□ -0.04
SEC13-216ENST00000479868 USP17L2Q6R6M4 530 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 SH3RF1Q7Z6J0 888 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 IMPACTQ9P2X3 320 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 PDE6BP35913 854 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 SCNN1DP51172 638 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 PAGE5Q96GU1 130 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 PCDHA6Q9UN73 950 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 SUGT1Q9Y2Z0 365 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 PCDHA8Q9Y5H6 950 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 PARP3Q9Y6F1 533 aa14.82□□□□□ -0.04
SEC13-216ENST00000479868 MYH8P13535 1937 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 PARP1P09874 1014 aaKnown RBP14.81□□□□□ -0.04
SEC13-216ENST00000479868 GSDMDP57764 484 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 C4orf32Q8N8J7 132 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 TRIML1Q8N9V2 468 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 MLKLQ8NB16 471 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 MASTLQ96GX5 879 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 PRIMPOLQ96LW4 560 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 MED15Q96RN5 788 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 SPZ1Q9BXG8 430 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 SERPINC1P01008 464 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 TOP1P11387 765 aaKnown RBP14.81□□□□□ -0.04
SEC13-216ENST00000479868 NOVP48745 357 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 UBASH3AP57075 661 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 GABPAQ06546 454 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 HSP90AA4PQ58FG1 418 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 ARMCX5Q6P1M9 558 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 TRMT44Q8IYL2 757 aaKnown RBP14.81□□□□□ -0.04
SEC13-216ENST00000479868 DAGLBQ8NCG7 672 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 CCDC148Q8NFR7 591 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 C16orf45Q96MC5 204 aaPredicted RBP14.81□□□□□ -0.04
SEC13-216ENST00000479868 LZTS2Q9BRK4 669 aa14.81□□□□□ -0.04
SEC13-216ENST00000479868 CCDC194A0A1B0GVG4 234 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 E2F4Q16254 413 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 USP27XA6NNY8 438 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 USP17L5A8MUK1 530 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 DPYDQ12882 1025 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 INF2Q27J81 1249 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 HOMER1Q86YM7 354 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 MYRIPQ8NFW9 859 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 STAMQ92783 540 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 ZNF622Q969S3 477 aaKnown RBP eCLIP14.8□□□□□ -0.04
SEC13-216ENST00000479868 KCNQ5Q9NR82 932 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 USP40Q9NVE5 1235 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 NFE2L3Q9Y4A8 694 aa14.8□□□□□ -0.04
SEC13-216ENST00000479868 AKR1B1P15121 316 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 CDC25AP30304 524 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 CFAP100Q494V2 611 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 ARL6IP4Q66PJ3 421 aaKnown RBP14.79□□□□□ -0.04
SEC13-216ENST00000479868 FLAD1Q8NFF5 587 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 CCDC34Q96HJ3 373 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 DBNDD1Q9H9R9 158 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 DACH1Q9UI36 760 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 PLIN4Q96Q06 1357 aa14.79□□□□□ -0.04
SEC13-216ENST00000479868 PTPN21Q16825 1174 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 GALNT17Q6IS24 598 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 CLEC10AQ8IUN9 316 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 ENOX1Q8TC92 643 aaKnown RBP14.78□□□□□ -0.04
SEC13-216ENST00000479868 ZMYND12Q9H0C1 365 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 VAT1LQ9HCJ6 419 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 MTMR4Q9NYA4 1195 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 TMEM232C9JQI7 657 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 G3V3G9 751 aa14.78□□□□□ -0.04
SEC13-216ENST00000479868 MYO1BO43795 1136 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms