RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 SCYL3Q8IZE3 742 aa13.82□□□□□ -0.2
TM9SF4-206ENST00000479591 AIFM3Q96NN9 605 aa13.82□□□□□ -0.2
TM9SF4-206ENST00000479591 RIOX1Q9H6W3 641 aa13.82□□□□□ -0.2
TM9SF4-206ENST00000479591 SSC5DA1L4H1 1573 aa13.82□□□□□ -0.2
TM9SF4-206ENST00000479591 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 ADM5C9JUS6 153 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 NDUFB10O96000 172 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 MMP1P03956 469 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 NF2P35240 595 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 EAPPQ56P03 285 aaPredicted RBP13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 NOL9Q5SY16 702 aaKnown RBP13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 PRAMEF18Q5VWM3 479 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 MCTP1Q6DN14 999 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 KLRG1Q96E93 195 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 WRNIP1Q96S55 665 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 AS3MTQ9HBK9 375 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 PICK1Q9NRD5 415 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 MYH15Q9Y2K3 1946 aa13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
TM9SF4-206ENST00000479591 UBE2Q2LH0YL09 131 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 hCG_1984214I3L0E3 225 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 RAD21O60216 631 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 PPP1R12BO60237 982 aaPredicted RBP13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 BMP3P12645 472 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 ECE1P42892 770 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 KRT85P78386 507 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 KIF23Q02241 960 aaPredicted RBP13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 ATL3Q6DD88 541 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 ZNF713Q8N859 430 aaPredicted RBP13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 CCDC148Q8NFR7 591 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
TM9SF4-206ENST00000479591 hCG_1642624A0A1W2PR95 340 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 VEGFAP15692 232 aaPredicted RBP13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 CALML3P27482 149 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 INPP5BP32019 993 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 KCTD1Q719H9 257 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 CCDC12Q8WUD4 166 aaPredicted RBP13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 LPAR1Q92633 364 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 WDR18Q9BV38 432 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 PHF20Q9BVI0 1012 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 UBA5Q9GZZ9 404 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 FOXP1Q9H334 677 aaPredicted RBP13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 GJB4Q9NTQ9 266 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 VPS54Q9P1Q0 977 aa13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
TM9SF4-206ENST00000479591 PAPPA2Q9BXP8 1791 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 PLA2G6O60733 806 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 U2AF2P26368 475 aaKnown RBP eCLIP13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 IREB2P48200 963 aaKnown RBP13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 USP14P54578 494 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 MAP3K9P80192 1104 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 DNM1Q05193 864 aaKnown RBP13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 FOXD4L6Q3SYB3 417 aaPredicted RBP13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 GALNT17Q6IS24 598 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 FOXD4L3Q6VB84 417 aaPredicted RBP13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 DIS3L2Q8IYB7 885 aaKnown RBP13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 ADGRF4Q8IZF3 695 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 ZNF396Q96N95 335 aaPredicted RBP13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 PIGSQ96S52 555 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 FEZ1Q99689 392 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 CFAP45Q9UL16 551 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 KCNJ14Q9UNX9 436 aa13.78□□□□□ -0.2
TM9SF4-206ENST00000479591 PNMA6FA0A0J9YX94 578 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 USP17L10C9JJH3 530 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 PTPRAP18433 802 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 KRT2P35908 639 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 STAT2P52630 851 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 NLRP5P59047 1200 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 TCHHQ07283 1943 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 HEATR3Q7Z4Q2 680 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 ZNF280CQ8ND82 737 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 ZKSCAN4Q969J2 545 aaPredicted RBP13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 SCAND2PQ9GZW5 306 aaPredicted RBP13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 VAT1LQ9HCJ6 419 aa13.77□□□□□ -0.21
TM9SF4-206ENST00000479591 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms