RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ARHGAP39Q9C0H5 1083 aa18.24■□□□□ 0.51
C9orf3-217ENST00000479161 FEM1BQ9UK73 627 aa18.24■□□□□ 0.51
C9orf3-217ENST00000479161 PPP1R9AQ9ULJ8 1098 aa18.24■□□□□ 0.51
C9orf3-217ENST00000479161 STX8Q9UNK0 236 aa18.24■□□□□ 0.51
C9orf3-217ENST00000479161 NEDD4P46934 1319 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 ZSWIM8A7E2V4 1837 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 CNMDO75829 334 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 TRDNQ13061 729 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
C9orf3-217ENST00000479161 SHCBP1Q8NEM2 672 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 MTA3Q9BTC8 594 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 ZSWIM5Q9P217 1185 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 HPS5Q9UPZ3 1129 aa18.23■□□□□ 0.51
C9orf3-217ENST00000479161 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
C9orf3-217ENST00000479161 TNPO2O14787 897 aaKnown RBP18.22■□□□□ 0.51
C9orf3-217ENST00000479161 ATP2A1O14983 1001 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 BMP3P12645 472 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 NECTIN1Q15223 517 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 Q3C1V9 767 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 FAM83BQ5T0W9 1011 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 CHURC1Q8WUH1 139 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 DCAF4Q8WV16 495 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 ARMC5Q96C12 935 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 BTBD7Q9P203 1132 aa18.22■□□□□ 0.51
C9orf3-217ENST00000479161 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
C9orf3-217ENST00000479161 NMT2O60551 498 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 KDM4AO75164 1064 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 COPB2P35606 906 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 NBPF11Q86T75 865 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 LRRC47Q8N1G4 583 aaKnown RBP18.21■□□□□ 0.51
C9orf3-217ENST00000479161 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 SOCS4Q8WXH5 440 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 SLF1Q9BQI6 1058 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 TMEM47Q9BQJ4 181 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 GJD2Q9UKL4 321 aa18.21■□□□□ 0.51
C9orf3-217ENST00000479161 B4E1Z4 1266 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 VWA5AO00534 786 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 STRNO43815 780 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 SLC25A27O95847 323 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 SNHG28P0DPA3 235 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 XRCC5P13010 732 aaKnown RBP18.2■□□□□ 0.5
C9orf3-217ENST00000479161 SLC1A4P43007 532 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 OAZ1P54368 228 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 TSGA10IPQ3SY00 556 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-217ENST00000479161 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 MROH8Q9H579 483 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 PLXNB2O15031 1838 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 CENPFP49454 3210 aa18.2■□□□□ 0.5
C9orf3-217ENST00000479161 E7EWF7 191 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 STAT2P52630 851 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 RNF20Q5VTR2 975 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 BTNL9Q6UXG8 535 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 ABRAQ8N0Z2 381 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 SLAIN1Q8ND83 568 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 REPS2Q8NFH8 660 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 USP6NLQ92738 828 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 ATG4CQ96DT6 458 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 PTCH2Q9Y6C5 1203 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
C9orf3-217ENST00000479161 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
C9orf3-217ENST00000479161 FLT3LGP49771 235 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 PRKCZQ05513 592 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 MORN1Q5T089 497 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
C9orf3-217ENST00000479161 GPR142Q7Z601 462 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 PLEKHH3Q7Z736 793 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 RIOX2Q8IUF8 465 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 CCAR1Q8IX12 1150 aaKnown RBP18.18■□□□□ 0.5
C9orf3-217ENST00000479161 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
C9orf3-217ENST00000479161 NKX2-3Q8TAU0 364 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 RAET1EQ8TD07 263 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 UBAC1Q9BSL1 405 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
C9orf3-217ENST00000479161 PORCNQ9H237 461 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 SLC38A10Q9HBR0 1119 aa18.18■□□□□ 0.5
C9orf3-217ENST00000479161 ZNF214Q9UL59 606 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-217ENST00000479161 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
C9orf3-217ENST00000479161 TNRC18O15417 2968 aaPredicted RBP18.17■□□□□ 0.5
C9orf3-217ENST00000479161 SLC15A5A6NIM6 579 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 SLC27A2O14975 620 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 RAD21O60216 631 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 REC8O95072 547 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 HOXC6P09630 235 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 PDHBP11177 359 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 CAPN2P17655 700 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 MCCP23508 829 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 SEC23AQ15436 765 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 SLC9C1Q4G0N8 1177 aa18.17■□□□□ 0.5
C9orf3-217ENST00000479161 GPATCH4Q5T3I0 446 aaKnown RBP18.17■□□□□ 0.5
C9orf3-217ENST00000479161 RALYLQ86SE5 291 aaKnown RBP18.17■□□□□ 0.5
C9orf3-217ENST00000479161 ENAHQ8N8S7 591 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms