RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SNX14Q9Y5W7 946 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 TNKSO95271 1327 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 LOC285556D6RIA3 1793 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 POTEFA5A3E0 1075 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 WDR46O15213 610 aaKnown RBP17.86■□□□□ 0.45
COL16A1-211ENST00000479100 PRC1O43663 620 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 MCM5P33992 734 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 SART3Q15020 963 aaKnown RBP17.86■□□□□ 0.45
COL16A1-211ENST00000479100 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 CATSPERGQ6ZRH7 1159 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 DGKHQ86XP1 1220 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 P2RX7Q99572 595 aaKnown RBP17.86■□□□□ 0.45
COL16A1-211ENST00000479100 ARHGAP39Q9C0H5 1083 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 KAT14Q9H8E8 782 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 CPA4Q9UI42 421 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 SYNPO2Q9UMS6 1093 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 ADGRA2Q96PE1 1338 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 NOVP48745 357 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 ANTXR2P58335 489 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 LACTBP83111 547 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-211ENST00000479100 ADCK5Q3MIX3 580 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 TSGA10IPQ3SY00 556 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 IFIT1BQ5T764 474 aaKnown RBP17.85■□□□□ 0.45
COL16A1-211ENST00000479100 KCNB2Q92953 911 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 JAKMIP1Q96N16 626 aaKnown RBP17.85■□□□□ 0.45
COL16A1-211ENST00000479100 MYH4Q9Y623 1939 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 PTCH2Q9Y6C5 1203 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 FLOT1O75955 427 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 CTGFP29279 349 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 SLC1A4P43007 532 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 HERVK_113P62684 666 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
COL16A1-211ENST00000479100 WTAPQ15007 396 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 CCDC96Q2M329 555 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 ZNF333Q96JL9 665 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 LRRC2Q9BYS8 371 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 ECM2O94769 699 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-211ENST00000479100 SLC34A2O95436 690 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 BMP3P12645 472 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 IKQ13123 557 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-211ENST00000479100 COG2Q14746 738 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 ARHGEF6Q15052 776 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 SEC23AQ15436 765 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 RASGRP2Q7LDG7 609 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 ANKS1AQ92625 1134 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 PAGR1Q9BTK6 254 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 FBXO28Q9NVF7 368 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 CPA1P15085 419 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 PRPF38BQ5VTL8 546 aaKnown RBP17.82■□□□□ 0.44
COL16A1-211ENST00000479100 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 KCTD1Q719H9 257 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
COL16A1-211ENST00000479100 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 DCAF4Q8WV16 495 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 GMCL1Q96IK5 515 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-211ENST00000479100 HOXC10Q9NYD6 342 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 TMEM232C9JQI7 657 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 GNRH1P01148 92 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 HMGB1P09429 215 aaKnown RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 CASTP20810 708 aaKnown RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 PSMA5P28066 241 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 DSG3P32926 999 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 GCLCP48506 637 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 FGD1P98174 961 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 TMEM87BQ96K49 555 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 SENP2Q9HC62 589 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 FEM1BQ9UK73 627 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 KIAA0100Q14667 2235 aaKnown RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 SPDYE16A6NNV3 312 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 PEX10O60683 326 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 BCRP11274 1271 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 GTF3C2Q8WUA4 911 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 KIFC2Q96AC6 838 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 ATG4CQ96DT6 458 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 SLF1Q9BQI6 1058 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 CTDP1Q9Y5B0 961 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 CCDC69A6NI79 296 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 PDHBP11177 359 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 EN2P19622 333 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-211ENST00000479100 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
COL16A1-211ENST00000479100 CATIPQ7Z7H3 387 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 CHURC1Q8WUH1 139 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 RBPJLQ9UBG7 517 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 PPP1R9AQ9ULJ8 1098 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 RPS6KB1P23443 525 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms