RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-211	ENST00000479092	ANKRD13C	Q8N6S4	541 aa		13.94	□□□□□ -0.18
PTPN7-211	ENST00000479092	PNMA1	Q8ND90	353 aa		13.94	□□□□□ -0.18
PTPN7-211	ENST00000479092	P2RX7	Q99572	595 aa	Known RBP	13.94	□□□□□ -0.18
PTPN7-211	ENST00000479092	SLF1	Q9BQI6	1058 aa		13.94	□□□□□ -0.18
PTPN7-211	ENST00000479092	PAGR1	Q9BTK6	254 aa		13.94	□□□□□ -0.18
PTPN7-211	ENST00000479092	HOXC10	Q9NYD6	342 aa		13.94	□□□□□ -0.18
PTPN7-211	ENST00000479092	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	BCR	P11274	1271 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	PSMA5	P28066	241 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	STAT2	P52630	851 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	ARHGEF6	Q15052	776 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	TSGA10IP	Q3SY00	556 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	CHST3	Q7LGC8	479 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	CCAR1	Q8IX12	1150 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	RASEF	Q8IZ41	740 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	CHMP4C	Q96CF2	233 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	TMEM87B	Q96K49	555 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	JAKMIP1	Q96N16	626 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	MTA3	Q9BTC8	594 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	USP26	Q9BXU7	913 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	FEM1B	Q9UK73	627 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	SNX14	Q9Y5W7	946 aa		13.93	□□□□□ -0.18
PTPN7-211	ENST00000479092	MYH4	Q9Y623	1939 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	PDHB	P11177	359 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	ANTXR2	P58335	489 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	LACTB	P83111	547 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	FGD1	P98174	961 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	C8orf34	Q49A92	452 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	LBX2	Q6XYB7	198 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	KCTD1	Q719H9	257 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	MB21D1	Q8N884	522 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	GPRC5A	Q8NFJ5	357 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	ANKS1A	Q92625	1134 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	KCNB2	Q92953	911 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	ATG4C	Q96DT6	458 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	CWC22	Q9HCG8	908 aa	Known RBP	13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	FBXO28	Q9NVF7	368 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	PPP1R9A	Q9ULJ8	1098 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	RABGAP1	Q9Y3P9	1069 aa		13.92	□□□□□ -0.18
PTPN7-211	ENST00000479092	WDR19	Q8NEZ3	1342 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	TMEM232	C9JQI7	657 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	DSG3	P32926	999 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	FCGRT	P55899	365 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	ERVK-9	P63128	1117 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	ERVK-24	P63145	666 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	CCNA1	P78396	465 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	SEC23A	Q15436	765 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	BLOC1S2	Q6QNY1	142 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	NFXL1	Q6ZNB6	911 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	DHX32	Q7L7V1	743 aa	Known RBP	13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	RASGRP2	Q7LDG7	609 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	CATIP	Q7Z7H3	387 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	FAM160B2	Q86V87	743 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	CD99L2	Q8TCZ2	262 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	CHURC1	Q8WUH1	139 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	KIFC2	Q96AC6	838 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	UPF2	Q9HAU5	1272 aa	Known RBP	13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	MORF4L1	Q9UBU8	362 aa		13.91	□□□□□ -0.18
PTPN7-211	ENST00000479092	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	CCDC69	A6NI79	296 aa		13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	SH2B2	O14492	632 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	ECM2	O94769	699 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	CAST	P20810	708 aa	Known RBP	13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	ZNF543	Q08ER8	600 aa		13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	ADCK5	Q3MIX3	580 aa		13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	ASPRV1	Q53RT3	343 aa		13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	GPATCH4	Q5T3I0	446 aa	Known RBP	13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	TMTC2	Q8N394	836 aa		13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	PRPF38A	Q8NAV1	312 aa	Known RBP	13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	EFCC1	Q9HA90	598 aa		13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092		A0A0G2JMZ2	1700 aa		13.9	□□□□□ -0.18
PTPN7-211	ENST00000479092	VWA5A	O00534	786 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	TNPO2	O14787	897 aa	Known RBP	13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	PLA2G6	O60733	806 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	ZBED4	O75132	1171 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	FMNL1	O95466	1100 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	PARP1	P09874	1014 aa	Known RBP	13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	SNHG28	P0DPA3	235 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	FDX1	P10109	184 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	PSMC4	P43686	418 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	ANAPC15	P60006	121 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	PLS1	Q14651	629 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	CTU1	Q7Z7A3	348 aa	Known RBP	13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	IGDCC4	Q8TDY8	1250 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	LRRC2	Q9BYS8	371 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	LY9	Q9HBG7	655 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	TXNRD2	Q9NNW7	524 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	GPCPD1	Q9NPB8	672 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	RBPJL	Q9UBG7	517 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	TRIM17	Q9Y577	477 aa		13.89	□□□□□ -0.19
PTPN7-211	ENST00000479092	DDAH1	O94760	285 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	GNRH1	P01148	92 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	MAPK4	P31152	587 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	LIFR	P42702	1097 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	SYDE2	Q5VT97	1194 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	WDR78	Q5VTH9	848 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	SYNE3	Q6ZMZ3	975 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	ZNF654	Q8IZM8	581 aa		13.88	□□□□□ -0.19
PTPN7-211	ENST00000479092	NUP133	Q8WUM0	1156 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms