RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 FLRT1Q9NZU1 646 aa22.34■■□□□ 1.17
SREBF1-212ENST00000478616 CLIP2Q9UDT6 1046 aa22.34■■□□□ 1.17
SREBF1-212ENST00000478616 SMCHD1A6NHR9 2005 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 PLXNA1Q9UIW2 1896 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 NMT2O60551 498 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 FLOT1O75955 427 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 PTPREP23469 700 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 GJA8P48165 433 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 TTC22Q5TAA0 569 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 RASGRP2Q7LDG7 609 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 ZNF444Q8N0Y2 327 aaPredicted RBP22.33■■□□□ 1.17
SREBF1-212ENST00000478616 SPATC1LQ9H0A9 340 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 RNF208Q9H0X6 261 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 HOXC10Q9NYD6 342 aa22.33■■□□□ 1.17
SREBF1-212ENST00000478616 ORC4O43929 436 aa22.32■■□□□ 1.16
SREBF1-212ENST00000478616 XRCC5P13010 732 aaKnown RBP22.32■■□□□ 1.16
SREBF1-212ENST00000478616 GRB14Q14449 540 aa22.32■■□□□ 1.16
SREBF1-212ENST00000478616 LRRC47Q8N1G4 583 aaKnown RBP22.32■■□□□ 1.16
SREBF1-212ENST00000478616 NUDT12Q9BQG2 462 aa22.32■■□□□ 1.16
SREBF1-212ENST00000478616 PPP1R9AQ9ULJ8 1098 aa22.32■■□□□ 1.16
SREBF1-212ENST00000478616 HMGCRP04035 888 aa22.31■■□□□ 1.16
SREBF1-212ENST00000478616 UBXN2AP68543 259 aa22.31■■□□□ 1.16
SREBF1-212ENST00000478616 PDE4BQ07343 736 aa22.31■■□□□ 1.16
SREBF1-212ENST00000478616 CWC27Q6UX04 472 aaKnown RBP22.31■■□□□ 1.16
SREBF1-212ENST00000478616 TBC1D10CQ8IV04 446 aa22.31■■□□□ 1.16
SREBF1-212ENST00000478616 NPLOC4Q8TAT6 608 aa22.31■■□□□ 1.16
SREBF1-212ENST00000478616 U2AF1L4Q8WU68 220 aaKnown RBP22.31■■□□□ 1.16
SREBF1-212ENST00000478616 SOCS4Q8WXH5 440 aa22.31■■□□□ 1.16
SREBF1-212ENST00000478616 GOPCQ9HD26 462 aa22.31■■□□□ 1.16
SREBF1-212ENST00000478616 BIN2Q9UBW5 565 aaPredicted RBP22.31■■□□□ 1.16
SREBF1-212ENST00000478616 ZNF214Q9UL59 606 aaPredicted RBP22.31■■□□□ 1.16
SREBF1-212ENST00000478616 ERCC3P19447 782 aa22.3■■□□□ 1.16
SREBF1-212ENST00000478616 HAND2P61296 217 aa22.3■■□□□ 1.16
SREBF1-212ENST00000478616 MAP2K5Q13163 448 aa22.3■■□□□ 1.16
SREBF1-212ENST00000478616 SKAP1Q86WV1 359 aa22.3■■□□□ 1.16
SREBF1-212ENST00000478616 CRISPLD2Q9H0B8 497 aa22.3■■□□□ 1.16
SREBF1-212ENST00000478616 SLC15A5A6NIM6 579 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 VWA5AO00534 786 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 SGPL1O95470 568 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 TTLL1O95922 423 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 HOXC6P09630 235 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 TSPY3P0CV98 308 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 TSPY8P0CW00 308 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 MNX1P50219 401 aaPredicted RBP22.29■■□□□ 1.16
SREBF1-212ENST00000478616 MB21D1Q8N884 522 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 GMCL1P1Q8NEA9 526 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 SHCBP1Q8NEM2 672 aa22.29■■□□□ 1.16
SREBF1-212ENST00000478616 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.29■■□□□ 1.16
SREBF1-212ENST00000478616 COBLO75128 1261 aa22.28■■□□□ 1.16
SREBF1-212ENST00000478616 RGS2P41220 211 aa22.28■■□□□ 1.16
SREBF1-212ENST00000478616 CCNA1P78396 465 aa22.28■■□□□ 1.16
SREBF1-212ENST00000478616 CACNB2Q08289 660 aaPredicted RBP22.28■■□□□ 1.16
SREBF1-212ENST00000478616 DEFB118Q96PH6 123 aa22.28■■□□□ 1.16
SREBF1-212ENST00000478616 APBA2Q99767 749 aa22.28■■□□□ 1.16
SREBF1-212ENST00000478616 ZNF287Q9HBT7 754 aa22.28■■□□□ 1.16
SREBF1-212ENST00000478616 SYNPO2Q9UMS6 1093 aa22.28■■□□□ 1.16
SREBF1-212ENST00000478616 CEP290O15078 2479 aa22.27■■□□□ 1.16
SREBF1-212ENST00000478616 SAMD1Q6SPF0 538 aaPredicted RBP22.27■■□□□ 1.16
SREBF1-212ENST00000478616 NEDD4P46934 1319 aa22.27■■□□□ 1.16
SREBF1-212ENST00000478616 SLC3A2P08195 630 aaKnown RBP22.26■■□□□ 1.15
SREBF1-212ENST00000478616 PRKAR2AP13861 404 aaKnown RBP22.26■■□□□ 1.15
SREBF1-212ENST00000478616 SLFN13Q68D06 897 aa22.26■■□□□ 1.15
SREBF1-212ENST00000478616 RCSD1Q6JBY9 416 aa22.26■■□□□ 1.15
SREBF1-212ENST00000478616 SLF1Q9BQI6 1058 aa22.26■■□□□ 1.15
SREBF1-212ENST00000478616 RIPK3Q9Y572 518 aa22.26■■□□□ 1.15
SREBF1-212ENST00000478616 RPTORQ8N122 1335 aa22.26■■□□□ 1.15
SREBF1-212ENST00000478616 RAD21O60216 631 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 ADORA2AP29274 412 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 CCND3P30281 292 aaPredicted RBP22.25■■□□□ 1.15
SREBF1-212ENST00000478616 WDR78Q5VTH9 848 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 RIOX2Q8IUF8 465 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 TRPV1Q8NER1 839 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 STAG1Q8WVM7 1258 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 LCTP09848 1927 aa22.25■■□□□ 1.15
SREBF1-212ENST00000478616 TSPY2A6NKD2 308 aa22.24■■□□□ 1.15
SREBF1-212ENST00000478616 RANBP6O60518 1105 aaKnown RBP22.24■■□□□ 1.15
SREBF1-212ENST00000478616 ZKSCAN1P17029 563 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-212ENST00000478616 PLS1Q14651 629 aa22.24■■□□□ 1.15
SREBF1-212ENST00000478616 AKNAD1Q5T1N1 836 aa22.24■■□□□ 1.15
SREBF1-212ENST00000478616 CHMP4CQ96CF2 233 aa22.24■■□□□ 1.15
SREBF1-212ENST00000478616 MCM3APO60318 1980 aa22.23■■□□□ 1.15
SREBF1-212ENST00000478616 CHMLP26374 656 aa22.23■■□□□ 1.15
SREBF1-212ENST00000478616 LHX8Q68G74 356 aa22.23■■□□□ 1.15
SREBF1-212ENST00000478616 CCAR1Q8IX12 1150 aaKnown RBP22.23■■□□□ 1.15
SREBF1-212ENST00000478616 DIS3LQ8TF46 1054 aaKnown RBP22.23■■□□□ 1.15
SREBF1-212ENST00000478616 DSCC1Q9BVC3 393 aa22.23■■□□□ 1.15
SREBF1-212ENST00000478616 MROH8Q9H579 483 aa22.23■■□□□ 1.15
SREBF1-212ENST00000478616 TCP11L1Q9NUJ3 509 aa22.23■■□□□ 1.15
SREBF1-212ENST00000478616 BMP3P12645 472 aa22.22■■□□□ 1.15
SREBF1-212ENST00000478616 STAT3P40763 770 aa22.22■■□□□ 1.15
SREBF1-212ENST00000478616 NCAPG2Q86XI2 1143 aa22.22■■□□□ 1.15
SREBF1-212ENST00000478616 GMCL1Q96IK5 515 aa22.22■■□□□ 1.15
SREBF1-212ENST00000478616 SLC38A10Q9HBR0 1119 aa22.22■■□□□ 1.15
SREBF1-212ENST00000478616 HMX1Q9NP08 348 aaPredicted RBP22.22■■□□□ 1.15
SREBF1-212ENST00000478616 ZNF536O15090 1300 aa22.22■■□□□ 1.15
SREBF1-212ENST00000478616 HIP1O00291 1037 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 ATP2A1O14983 1001 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 STRNO43815 780 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 MCCP23508 829 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms