RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
PCCB-214ENST00000478469 FLT1P17948 1338 aa13.55□□□□□ -0.24
PCCB-214ENST00000478469 GPR75-ASB3A0A0A6YYF3 556 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 hCG_1984214I3L0E3 225 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 DKC1O60832 514 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCCB-214ENST00000478469 ZNF713Q8N859 430 aaPredicted RBP13.54□□□□□ -0.24
PCCB-214ENST00000478469 LY9Q9HBG7 655 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 UBASH3AP57075 661 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 TMTC3Q6ZXV5 915 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 VTI1AQ96AJ9 217 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 WRNIP1Q96S55 665 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 NUP88Q99567 741 aaPredicted RBP13.54□□□□□ -0.24
PCCB-214ENST00000478469 SALL3Q9BXA9 1300 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
PCCB-214ENST00000478469 RCAN1P53805 252 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 SYDE2Q5VT97 1194 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 PCDHA12Q9UN75 941 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 GRIN3BO60391 1043 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 STX17P56962 302 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 PRR16Q569H4 304 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 SGMS1Q86VZ5 419 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 TCHPQ9BT92 498 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 IL25Q9H293 177 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 CLSTN2Q9H4D0 955 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
PCCB-214ENST00000478469 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
PCCB-214ENST00000478469 GAS7O60861 476 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 TRAPPC10P48553 1259 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 HDLBPQ00341 1268 aaKnown RBP13.53□□□□□ -0.24
PCCB-214ENST00000478469 NLRX1Q86UT6 975 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 CABP7Q86V35 215 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 COA7Q96BR5 231 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 ENTPD3O75355 529 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 MMP1P03956 469 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 TM4SF1P30408 202 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 PPP4CP60510 307 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 KIF23Q02241 960 aaPredicted RBP13.53□□□□□ -0.24
PCCB-214ENST00000478469 PTGDRQ13258 359 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 RASA3Q14644 834 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 ARHGEF16Q5VV41 709 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 CTAGE1Q96RT6 745 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 BICDL2A1A5D9 508 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
PCCB-214ENST00000478469 OR52Z1P0C646 297 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 RASGRP4Q8TDF6 673 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 DNM3Q9UQ16 869 aa13.53□□□□□ -0.24
PCCB-214ENST00000478469 NR5A1Q13285 461 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 BRDTQ58F21 947 aaPredicted RBP13.52□□□□□ -0.24
PCCB-214ENST00000478469 NCAPG2Q86XI2 1143 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 FAM177A1Q8N128 213 aaPredicted RBP13.52□□□□□ -0.24
PCCB-214ENST00000478469 SLC10A4Q96EP9 437 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.24
PCCB-214ENST00000478469 DISP2A7MBM2 1401 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 ARHGEF35A5YM69 484 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 EEF2P13639 858 aaKnown RBP13.52□□□□□ -0.24
PCCB-214ENST00000478469 AKR1B1P15121 316 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 GSDMDP57764 484 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 ARHGAP29Q52LW3 1261 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 KRT26Q7Z3Y9 468 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 ILDR1Q86SU0 546 aaPredicted RBP13.52□□□□□ -0.24
PCCB-214ENST00000478469 USP37Q86T82 979 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 AGBL3Q8NEM8 1001 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 EPB41L4AQ9HCS5 686 aaPredicted RBP13.52□□□□□ -0.24
PCCB-214ENST00000478469 LMO7Q8WWI1 1683 aa13.52□□□□□ -0.24
PCCB-214ENST00000478469 PDE4DQ08499 809 aa13.52□□□□□ -0.25
PCCB-214ENST00000478469 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
PCCB-214ENST00000478469 CCDC150Q8NCX0 1101 aa13.52□□□□□ -0.25
PCCB-214ENST00000478469 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.25
PCCB-214ENST00000478469 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 RPS12P25398 132 aaKnown RBP13.51□□□□□ -0.25
PCCB-214ENST00000478469 PPP1R2P41236 205 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
PCCB-214ENST00000478469 CDC37Q16543 378 aaPredicted RBP13.51□□□□□ -0.25
PCCB-214ENST00000478469 GLIPR1L2Q4G1C9 344 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 KIAA1328Q86T90 577 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 DCAF4Q8WV16 495 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 CHAMP1Q96JM3 812 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 NT5C3AQ9H0P0 336 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 ALDH8A1Q9H2A2 487 aaPredicted RBP13.51□□□□□ -0.25
PCCB-214ENST00000478469 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 ZHX2Q9Y6X8 837 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 USP17L5A8MUK1 530 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 ESPNB1AK53 854 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 F5H6K3 240 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
PCCB-214ENST00000478469 KLRC3Q07444 240 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 SLC39A14Q15043 492 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 PCDHA7Q9UN72 937 aa13.51□□□□□ -0.25
PCCB-214ENST00000478469 CLIC4Q9Y696 253 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms