RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 UBR1Q8IWV7 1749 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 DDX60Q8IY21 1712 aaKnown RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 PPP1R37O75864 691 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 CKAP4Q07065 602 aaKnown RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 SNCBQ16143 134 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 KCTD19Q17RG1 926 aaPredicted RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 CMTR1Q8N1G2 835 aaKnown RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 CEP120Q8N960 986 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 NGDNQ8NEJ9 315 aaKnown RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 NCOA7Q8NI08 942 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 BLZF1Q9H2G9 400 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 VPS54Q9P1Q0 977 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 PIK3C2AO00443 1686 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 SLIT1O75093 1534 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 ESYT3A0FGR9 886 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 ATP5J2-PTCD1G3V325 749 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 PTCD1O75127 700 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 ATP2C2O75185 946 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 FKBP4Q02790 459 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 QPCTQ16769 361 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 ZNF530Q6P9A1 599 aaPredicted RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 APOA5Q6Q788 366 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 KDM7AQ6ZMT4 941 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 ATG9AQ7Z3C6 839 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 RALYLQ86SE5 291 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 CCDC82Q8N4S0 544 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 PIK3R5Q8WYR1 880 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 PAGE5Q96GU1 130 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 RPGRIP1Q96KN7 1286 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 CCDC114Q96M63 670 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 CPDO75976 1380 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 PXDNQ92626 1479 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 E7EVH7 732 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 CDC25CP30307 473 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 IARSP41252 1262 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 MAP2K1Q02750 393 aaPredicted RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 UBXN1Q04323 297 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 NAA25Q14CX7 972 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 TRADDQ15628 312 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 HAUS3Q68CZ6 603 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 TBC1D10CQ8IV04 446 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 DIS3L2Q8IYB7 885 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 SPATA4Q8NEY3 305 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 LRRC59Q96AG4 307 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 CCDC43Q96MW1 224 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 SLC26A6Q9BXS9 759 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 PPANQ9NQ55 473 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 LIMA1Q9UHB6 759 aaKnown RBP11.01□□□□□ -0.65
COL13A1-207ENST00000478219 TNRQ92752 1358 aa11.01□□□□□ -0.65
COL13A1-207ENST00000478219 LRRC10BA6NIK2 292 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 WNT7AO00755 349 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 HSF2BPO75031 334 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 IFIT1P09914 478 aaKnown RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 GRIK3Q13003 919 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 TMED8Q6PL24 325 aaPredicted RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 KIAA1328Q86T90 577 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 GPIHBP1Q8IV16 184 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 MMGT1Q8N4V1 131 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 RUFY1Q96T51 708 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 ANGEL1Q9UNK9 670 aaKnown RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 CAPN6Q9Y6Q1 641 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 DDX58O95786 925 aaKnown RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 NR1D1P20393 614 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 CARSP49589 748 aaKnown RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 KLK7P49862 253 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 CDR1P51861 262 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 TCP11X2Q5H9J9 407 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 CHADLQ6NUI6 762 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 NFRKBQ6P4R8 1299 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 KRT26Q7Z3Y9 468 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 SH3RF1Q7Z6J0 888 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 SPATS2Q86XZ4 545 aaKnown RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 IQCKQ8N0W5 287 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 CYFIP2Q96F07 1278 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 AGPAT5Q9NUQ2 364 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 SRPRBQ9Y5M8 271 aaKnown RBP11□□□□□ -0.65
COL13A1-207ENST00000478219 MAP3K15Q6ZN16 1313 aa11□□□□□ -0.65
COL13A1-207ENST00000478219 DIP2AQ14689 1571 aa10.99□□□□□ -0.65
COL13A1-207ENST00000478219 RGPD8O14715 1765 aaPredicted RBP10.99□□□□□ -0.65
COL13A1-207ENST00000478219 KCNJ18B7U540 433 aa10.99□□□□□ -0.65
COL13A1-207ENST00000478219 ZNF263O14978 683 aa10.99□□□□□ -0.65
COL13A1-207ENST00000478219 RNMTO43148 476 aaKnown RBP10.99□□□□□ -0.65
COL13A1-207ENST00000478219 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
COL13A1-207ENST00000478219 MDH1P40925 334 aaKnown RBP10.99□□□□□ -0.65
COL13A1-207ENST00000478219 SLC39A6Q13433 755 aa10.99□□□□□ -0.65
COL13A1-207ENST00000478219 TRIM29Q14134 588 aa10.99□□□□□ -0.65
COL13A1-207ENST00000478219 KCNJ12Q14500 433 aa10.99□□□□□ -0.65
COL13A1-207ENST00000478219 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
COL13A1-207ENST00000478219 LRRC24Q50LG9 513 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms