RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-208ENST00000478196 SNX17Q15036 470 aa6.36□□□□□ -1.39
RPS27A-208ENST00000478196 ALG1LQ6GMV1 187 aa6.36□□□□□ -1.39
RPS27A-208ENST00000478196 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
RPS27A-208ENST00000478196 FAM8A1Q9UBU6 413 aa6.36□□□□□ -1.39
RPS27A-208ENST00000478196 TJP2Q9UDY2 1190 aa6.36□□□□□ -1.39
RPS27A-208ENST00000478196 SPG7Q9UQ90 795 aa6.36□□□□□ -1.39
RPS27A-208ENST00000478196 TTC37Q6PGP7 1564 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.35□□□□□ -1.391e-13■■■■□ 26.2
RPS27A-208ENST00000478196 VPS8Q8N3P4 1428 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 RBAK-RBAKDNI3L0D1 243 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 MAPK1P28482 360 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 PDE6BP35913 854 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 TIGD5Q53EQ6 642 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 TTBK2Q6IQ55 1244 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 TSPYL5Q86VY4 417 aaPredicted RBP6.35□□□□□ -1.39
RPS27A-208ENST00000478196 TMEM87BQ96K49 555 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 DPH2Q9BQC3 489 aaPredicted RBP6.35□□□□□ -1.39
RPS27A-208ENST00000478196 GCM1Q9NP62 436 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 RTEL1Q9NZ71 1219 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 KCNH3Q9ULD8 1083 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 CEP131Q9UPN4 1083 aa6.35□□□□□ -1.39
RPS27A-208ENST00000478196 CCDC18Q5T9S5 1454 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 PGRP06401 933 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 LMNB1P20700 586 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 LTKP29376 864 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 MAPK8P45983 427 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 RPS26P62854 115 aaKnown RBP6.34□□□□□ -1.39
RPS27A-208ENST00000478196 CHRNEQ04844 493 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 PDE4CQ08493 712 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 DNAJB8Q8NHS0 232 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 CXorf38Q8TB03 319 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 C12orf49Q9H741 205 aa6.34□□□□□ -1.39
RPS27A-208ENST00000478196 TROQ12816 1431 aaPredicted RBP6.33□□□□□ -1.4
RPS27A-208ENST00000478196 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 ADAMTS20P59510 1910 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 PLEKHD1A6NEE1 506 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 SASH1O94885 1247 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 USP17L7P0C7H9 530 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 PDE4BQ07343 736 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 MCATQ8IVS2 390 aaKnown RBP6.33□□□□□ -1.4
RPS27A-208ENST00000478196 SGPP1Q9BX95 441 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
RPS27A-208ENST00000478196 GTF3C3Q9Y5Q9 886 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 CDC42BPAQ5VT25 1732 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 MYO5CQ9NQX4 1742 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 CDC42BPBQ9Y5S2 1711 aa6.33□□□□□ -1.4
RPS27A-208ENST00000478196 TIAM1Q13009 1591 aa6.32□□□□□ -1.4
RPS27A-208ENST00000478196 TRIM13O60858 407 aa6.32□□□□□ -1.4
RPS27A-208ENST00000478196 ATP2B2Q01814 1243 aa6.32□□□□□ -1.4
RPS27A-208ENST00000478196 DUSP4Q13115 394 aa6.32□□□□□ -1.4
RPS27A-208ENST00000478196 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
RPS27A-208ENST00000478196 GPR160Q9UJ42 338 aa6.32□□□□□ -1.4
RPS27A-208ENST00000478196 PCDHA11Q9Y5I1 949 aa6.32□□□□□ -1.4
RPS27A-208ENST00000478196 MAP3K1Q13233 1512 aa6.31□□□□□ -1.4
RPS27A-208ENST00000478196 FMR1Q06787 632 aaKnown RBP eCLIP6.31□□□□□ -1.4
RPS27A-208ENST00000478196 ERICH6BQ5W0A0 696 aa6.31□□□□□ -1.4
RPS27A-208ENST00000478196 ANKS4BQ8N8V4 417 aa6.31□□□□□ -1.4
RPS27A-208ENST00000478196 ADAM30Q9UKF2 790 aa6.31□□□□□ -1.4
RPS27A-208ENST00000478196 ARAP3Q8WWN8 1544 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 TEX14Q8IWB6 1497 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 KDM6BO15054 1643 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 PREX2Q70Z35 1606 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 SEPT6Q14141 434 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 SSPNQ14714 243 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 ZSCAN29Q8IWY8 852 aaPredicted RBP6.3□□□□□ -1.4
RPS27A-208ENST00000478196 SIGLEC10Q96LC7 697 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 SETDB2Q96T68 719 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 XYLT2Q9H1B5 865 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 CDK11AQ9UQ88 783 aaPredicted RBP6.3□□□□□ -1.4
RPS27A-208ENST00000478196 PCDHB5Q9Y5E4 795 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 IRAK3Q9Y616 596 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 PLCH2O75038 1416 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 EHBP1L1Q8N3D4 1523 aa6.3□□□□□ -1.4
RPS27A-208ENST00000478196 NEO1Q92859 1461 aa6.29□□□□□ -1.4
RPS27A-208ENST00000478196 OR14I1A6ND48 311 aa6.29□□□□□ -1.4
RPS27A-208ENST00000478196 RICTORQ6R327 1708 aa6.29□□□□□ -1.4
RPS27A-208ENST00000478196 PRRT2Q7Z6L0 340 aaPredicted RBP6.29□□□□□ -1.4
RPS27A-208ENST00000478196 PPP1R13LQ8WUF5 828 aa6.29□□□□□ -1.4
RPS27A-208ENST00000478196 ACSF2Q96CM8 615 aaPredicted RBP6.29□□□□□ -1.4
RPS27A-208ENST00000478196 SHISA4Q96DD7 197 aa6.29□□□□□ -1.4
RPS27A-208ENST00000478196 FRMD6Q96NE9 622 aa6.29□□□□□ -1.4
RPS27A-208ENST00000478196 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
RPS27A-208ENST00000478196 GNEQ9Y223 722 aaKnown RBP6.29□□□□□ -1.4
RPS27A-208ENST00000478196 LRRC9Q6ZRR7 1453 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 FRMPD1Q5SYB0 1578 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 HRKO00198 91 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 PSPNO60542 156 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 PI3P19957 117 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 CCDC85BQ15834 202 aaPredicted RBP6.28□□□□□ -1.4
RPS27A-208ENST00000478196 SKOR2Q2VWA4 1001 aaPredicted RBP6.28□□□□□ -1.4
RPS27A-208ENST00000478196 AGMOQ6ZNB7 445 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 CYB5D2Q8WUJ1 264 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 BORCS6Q96GS4 357 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 MIR1-1HGQ9H1L0 117 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 GPATCH8Q9UKJ3 1502 aaKnown RBP6.28□□□□□ -1.4
RPS27A-208ENST00000478196 FANCAO15360 1455 aa6.28□□□□□ -1.4
RPS27A-208ENST00000478196 SUPT6HQ7KZ85 1726 aaKnown RBP6.28□□□□□ -1.4
RPS27A-208ENST00000478196 CFAP74Q9C0B2 1584 aa6.27□□□□□ -1.41
RPS27A-208ENST00000478196 AKNAQ7Z591 1439 aa6.27□□□□□ -1.41
RPS27A-208ENST00000478196 CELA3BP08861 270 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms