RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 KANSL2Q9H9L4 492 aa20.08■□□□□ 0.81
TRIM13-208ENST00000478111 ECHDC1Q9NTX5 307 aa20.08■□□□□ 0.81
TRIM13-208ENST00000478111 GSG1L2A8MUP6 293 aa20.07■□□□□ 0.8
TRIM13-208ENST00000478111 PRAMEF19Q5SWL8 479 aa20.07■□□□□ 0.8
TRIM13-208ENST00000478111 DDRGK1Q96HY6 314 aa20.07■□□□□ 0.8
TRIM13-208ENST00000478111 MAML3Q96JK9 1138 aa20.07■□□□□ 0.8
TRIM13-208ENST00000478111 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
TRIM13-208ENST00000478111 LTBP2Q14767 1821 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 MYH4Q9Y623 1939 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 SEPT4O43236 478 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 ATN1P54259 1190 aaPredicted RBP20.06■□□□□ 0.8
TRIM13-208ENST00000478111 MDM2Q00987 491 aaPredicted RBP20.06■□□□□ 0.8
TRIM13-208ENST00000478111 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 GJC2Q5T442 439 aaPredicted RBP20.06■□□□□ 0.8
TRIM13-208ENST00000478111 ANO1Q5XXA6 986 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 KBTBD3Q8NAB2 608 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 REPS2Q8NFH8 660 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 OSBP2Q969R2 916 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 ARPP21Q9UBL0 812 aaPredicted RBP20.06■□□□□ 0.8
TRIM13-208ENST00000478111 CUL9Q8IWT3 2517 aa20.06■□□□□ 0.8
TRIM13-208ENST00000478111 SLC25A27O95847 323 aa20.05■□□□□ 0.8
TRIM13-208ENST00000478111 FCER1AP12319 257 aa20.05■□□□□ 0.8
TRIM13-208ENST00000478111 RASA1P20936 1047 aa20.05■□□□□ 0.8
TRIM13-208ENST00000478111 SAMD1Q6SPF0 538 aaPredicted RBP20.05■□□□□ 0.8
TRIM13-208ENST00000478111 RIOX2Q8IUF8 465 aa20.05■□□□□ 0.8
TRIM13-208ENST00000478111 SLC5A4Q9NY91 659 aa20.05■□□□□ 0.8
TRIM13-208ENST00000478111 PPP1R9AQ9ULJ8 1098 aa20.05■□□□□ 0.8
TRIM13-208ENST00000478111 UNC80Q8N2C7 3258 aa20.05■□□□□ 0.8
TRIM13-208ENST00000478111 VWA5AO00534 786 aa20.04■□□□□ 0.8
TRIM13-208ENST00000478111 FAM83BQ5T0W9 1011 aa20.04■□□□□ 0.8
TRIM13-208ENST00000478111 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
TRIM13-208ENST00000478111 GIMAP6Q6P9H5 292 aa20.04■□□□□ 0.8
TRIM13-208ENST00000478111 Q7L0L9 218 aa20.04■□□□□ 0.8
TRIM13-208ENST00000478111 ARRDC4Q8NCT1 418 aa20.04■□□□□ 0.8
TRIM13-208ENST00000478111 GOPCQ9HD26 462 aa20.04■□□□□ 0.8
TRIM13-208ENST00000478111 ZNF214Q9UL59 606 aaPredicted RBP20.04■□□□□ 0.8
TRIM13-208ENST00000478111 STAT3P40763 770 aa20.03■□□□□ 0.8
TRIM13-208ENST00000478111 RTP1P59025 263 aa20.03■□□□□ 0.8
TRIM13-208ENST00000478111 DEFB123Q8N688 67 aa20.03■□□□□ 0.8
TRIM13-208ENST00000478111 ROBO3Q96MS0 1386 aa20.03■□□□□ 0.8
TRIM13-208ENST00000478111 RNF113AO15541 343 aaKnown RBP20.02■□□□□ 0.8
TRIM13-208ENST00000478111 PGK2P07205 417 aa20.02■□□□□ 0.8
TRIM13-208ENST00000478111 ZNF792Q3KQV3 632 aa20.02■□□□□ 0.8
TRIM13-208ENST00000478111 SLC39A5Q6ZMH5 540 aa20.02■□□□□ 0.8
TRIM13-208ENST00000478111 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.8
TRIM13-208ENST00000478111 APPBP2Q92624 585 aa20.02■□□□□ 0.8
TRIM13-208ENST00000478111 MMP19Q99542 508 aa20.02■□□□□ 0.8
TRIM13-208ENST00000478111 EPB41L4AQ9HCS5 686 aaPredicted RBP20.02■□□□□ 0.8
TRIM13-208ENST00000478111 IGKV6D-41A0A0C4DH26 115 aa20.01■□□□□ 0.79
TRIM13-208ENST00000478111 SNX17Q15036 470 aa20.01■□□□□ 0.79
TRIM13-208ENST00000478111 LRRC41Q15345 812 aa20.01■□□□□ 0.79
TRIM13-208ENST00000478111 FAM47AQ5JRC9 791 aa20.01■□□□□ 0.79
TRIM13-208ENST00000478111 NUP88Q99567 741 aaPredicted RBP20.01■□□□□ 0.79
TRIM13-208ENST00000478111 TINF2Q9BSI4 451 aa20.01■□□□□ 0.79
TRIM13-208ENST00000478111 NYAP2Q9P242 653 aa20.01■□□□□ 0.79
TRIM13-208ENST00000478111 DIS3Q9Y2L1 958 aaKnown RBP20.01■□□□□ 0.79
TRIM13-208ENST00000478111 MINDY4BA8MYZ0 360 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 F5H6K3 240 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 M0R2C6 588 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 GPAA1O43292 621 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 RAD21O60216 631 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 TAL1P17542 331 aaPredicted RBP20■□□□□ 0.79
TRIM13-208ENST00000478111 KLRC3Q07444 240 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 MKNK2Q9HBH9 465 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 MTMR10Q9NXD2 777 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 NRBP1Q9UHY1 535 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 ATP11BQ9Y2G3 1177 aa20■□□□□ 0.79
TRIM13-208ENST00000478111 KBTBD13C9JR72 458 aa19.99■□□□□ 0.79
TRIM13-208ENST00000478111 ADCYAP1R1P41586 468 aa19.99■□□□□ 0.79
TRIM13-208ENST00000478111 KCTD2Q14681 263 aa19.99■□□□□ 0.79
TRIM13-208ENST00000478111 SLC17A8Q8NDX2 589 aa19.99■□□□□ 0.79
TRIM13-208ENST00000478111 SLF1Q9BQI6 1058 aa19.99■□□□□ 0.79
TRIM13-208ENST00000478111 RIPK3Q9Y572 518 aa19.99■□□□□ 0.79
TRIM13-208ENST00000478111 MCM3APO60318 1980 aa19.99■□□□□ 0.79
TRIM13-208ENST00000478111 EYSQ5T1H1 3165 aa19.98■□□□□ 0.79
TRIM13-208ENST00000478111 NDUFB10O96000 172 aa19.98■□□□□ 0.79
TRIM13-208ENST00000478111 ZFYP08048 801 aaPredicted RBP19.98■□□□□ 0.79
TRIM13-208ENST00000478111 ZNF865P0CJ78 1059 aaPredicted RBP19.98■□□□□ 0.79
TRIM13-208ENST00000478111 MKL1Q969V6 931 aa19.98■□□□□ 0.79
TRIM13-208ENST00000478111 FERMT2Q96AC1 680 aa19.98■□□□□ 0.79
TRIM13-208ENST00000478111 GPATCH3Q96I76 525 aa19.98■□□□□ 0.79
TRIM13-208ENST00000478111 LBHD1Q9BQE6 289 aaPredicted RBP19.98■□□□□ 0.79
TRIM13-208ENST00000478111 CDH23Q9H251 3354 aa19.98■□□□□ 0.79
TRIM13-208ENST00000478111 PRDM1O75626 825 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 MYCNP04198 464 aaPredicted RBP19.97■□□□□ 0.79
TRIM13-208ENST00000478111 COPB2P35606 906 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 TRIM60Q495X7 471 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 C1orf53Q5VUE5 145 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 PI4K2BQ8TCG2 481 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 SEC62Q99442 399 aaKnown RBP19.97■□□□□ 0.79
TRIM13-208ENST00000478111 CLIP2Q9UDT6 1046 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 PHF24Q9UPV7 400 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
TRIM13-208ENST00000478111 PATL2C9JE40 543 aaKnown RBP19.96■□□□□ 0.79
TRIM13-208ENST00000478111 POTEB2H3BUK9 544 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 ATP2A1O14983 1001 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 GNAT2P19087 354 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 SNRNP48Q6IEG0 339 aaKnown RBP19.96■□□□□ 0.79
TRIM13-208ENST00000478111 SH3RF1Q7Z6J0 888 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 IFNL3Q8IZI9 196 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms