RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 MAPK4P31152 587 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 KLRC3Q07444 240 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 CACNB2Q08289 660 aaPredicted RBP12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 LRRC47Q8N1G4 583 aaKnown RBP12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 REPS2Q8NFH8 660 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 SPATC1LQ9H0A9 340 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 RAD21O60216 631 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 COBLO75128 1261 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 SDSP20132 328 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 PTPREP23469 700 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 TFAP4Q01664 338 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 GRB14Q14449 540 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 WDR78Q5VTH9 848 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 CRISPLD2Q9H0B8 497 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 WDR46O15213 610 aaKnown RBP12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 HAND2P61296 217 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 UBXN2AP68543 259 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 MAP2K5Q13163 448 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 MCMDC2Q4G0Z9 681 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 MKL1Q969V6 931 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 ZNF214Q9UL59 606 aaPredicted RBP12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 RIPK3Q9Y572 518 aa12.19□□□□□ -0.46
LCLAT1-209ENST00000478015 VWA5AO00534 786 aa12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 FGRP09769 529 aa12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 PLS1Q14651 629 aa12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 ZNF444Q8N0Y2 327 aaPredicted RBP12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 TRPV1Q8NER1 839 aa12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 NACAP1Q9BZK3 213 aa12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 COL6A3P12111 3177 aa12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 PLIN4Q96Q06 1357 aa12.18□□□□□ -0.46
LCLAT1-209ENST00000478015 ADORA2AP29274 412 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 CYP2C19P33261 490 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 ALX1Q15699 326 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 LRRFIP1Q32MZ4 808 aaKnown RBP12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 LHX8Q68G74 356 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 CWC27Q6UX04 472 aaKnown RBP12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 TBC1D10CQ8IV04 446 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 GTF3C2Q8WUA4 911 aaPredicted RBP12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 SOCS4Q8WXH5 440 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 ANAPC4Q9UJX5 808 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 RPTORQ8N122 1335 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 APBA2Q99767 749 aa12.17□□□□□ -0.46
LCLAT1-209ENST00000478015 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 CDH23Q9H251 3354 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 FRMPD3Q5JV73 1810 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 SLC15A5A6NIM6 579 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 TTLL1O95922 423 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 PGK2P07205 417 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 HOXC6P09630 235 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 TSPY3P0CV98 308 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 TSPY8P0CW00 308 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 TAL1P17542 331 aaPredicted RBP12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 RGS2P41220 211 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 PAWRQ96IZ0 340 aaKnown RBP12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
LCLAT1-209ENST00000478015 ZNF236Q9UL36 1845 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 H0YGN5 161 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 TFRCP02786 760 aaKnown RBP12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 NOVP48745 357 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 CCNA1P78396 465 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 PDE4BQ07343 736 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 PRAMEF19Q5SWL8 479 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 HMX1Q9NP08 348 aaPredicted RBP12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 MCM3APO60318 1980 aa12.15□□□□□ -0.46
LCLAT1-209ENST00000478015 RANBP6O60518 1105 aaKnown RBP12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 MCCP23508 829 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 SNAP25P60880 206 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 RCSD1Q6JBY9 416 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 NEDD4P46934 1319 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 A0A0C4DFX4 3053 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 PFASO15067 1338 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 ORC4O43929 436 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 STAT3P40763 770 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 TTC22Q5TAA0 569 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 KCTD1Q719H9 257 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 GMCL1P1Q8NEA9 526 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 SHCBP1Q8NEM2 672 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 KIFC2Q96AC6 838 aa12.14□□□□□ -0.47
LCLAT1-209ENST00000478015 SLF1Q9BQI6 1058 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms