RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
SPTLC1-205ENST00000477888 RAI14Q9P0K7 980 aa9.05□□□□□ -0.96
SPTLC1-205ENST00000477888 EPOPA6NHQ4 379 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 ARVCFO00192 962 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 CD4P01730 458 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 DDX10Q13206 875 aaKnown RBP9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 GJD3Q8N144 294 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 SPATA5Q8NB90 893 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 VWCEQ96DN2 955 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 XAGE2Q96GT9 111 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 GLT1D1Q96MS3 346 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 PRKRIP1Q9H875 184 aaPredicted RBP9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 AATFQ9NY61 560 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 DIS3Q9Y2L1 958 aaKnown RBP9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 CACNA1AO00555 2505 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 TRANK1O15050 2925 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 SYNRGQ9UMZ2 1314 aa9.04□□□□□ -0.96
SPTLC1-205ENST00000477888 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 A0A1B0GUL7 405 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 MYADML2A6NDP7 307 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 APBB1O00213 710 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 BAG3O95817 575 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 FCER1AP12319 257 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 ALADP13716 330 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 PLCG2P16885 1265 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 CST5P28325 142 aaPredicted RBP9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 IRX5P78411 483 aaPredicted RBP9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 MVPQ14764 893 aaKnown RBP9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 ZNF792Q3KQV3 632 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 ATF7IPQ6VMQ6 1270 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 ADGRA1Q86SQ6 560 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 NCAPG2Q86XI2 1143 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 MB21D1Q8N884 522 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 UIMC1Q96RL1 719 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 PA2G4Q9UQ80 394 aaKnown RBP9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 SLC4A7Q9Y6M7 1214 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 UMODL1Q5DID0 1318 aa9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 PRRC2BQ5JSZ5 2229 aaKnown RBP9.03□□□□□ -0.96
SPTLC1-205ENST00000477888 A0A0U1RQG5 324 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 A0A1W2PRG0 241 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 LPXNO60711 386 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 PGK2P07205 417 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 ASGR1P07306 291 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 CA3P07451 260 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 DSG3P32926 999 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 NBR1Q14596 966 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 FAM178BQ8IXR5 827 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 PHOX2BQ99453 314 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 NOL10Q9BSC4 688 aaKnown RBP9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 CERS4Q9HA82 394 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 SAP30BPQ9UHR5 308 aaKnown RBP9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 PLXNA1Q9UIW2 1896 aa9.02□□□□□ -0.97
SPTLC1-205ENST00000477888 USP34Q70CQ2 3546 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 POTEB3A0JP26 581 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 ST18O60284 1047 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 DUSP11O75319 330 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 SNAI1O95863 264 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 HLA-DOAP06340 250 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 ATP2A2P16615 1042 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 FOXK2Q01167 660 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 PLS1Q14651 629 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 TMEM132BQ14DG7 1078 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 ABCB5Q2M3G0 1257 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 CERKLQ49MI3 558 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 TMEM67Q5HYA8 995 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 KIAA1755Q5JYT7 1200 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 POTEBQ6S5H4 581 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 SLC43A3Q8NBI5 491 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 PCSK9Q8NBP7 692 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 VTI1AQ96AJ9 217 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 EHD4Q9H223 541 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 HIPK3Q9H422 1215 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 LRP2BPQ9P2M1 347 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 SERPINB13Q9UIV8 391 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 FAM184BQ9ULE4 1060 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 ADAMTS5Q9UNA0 930 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 CNPY2Q9Y2B0 182 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 AKAP2Q9Y2D5 859 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 CFAP54Q96N23 3096 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
SPTLC1-205ENST00000477888 CTAGE5O15320 804 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 TLR3O15455 904 aaKnown RBP9□□□□□ -0.97
SPTLC1-205ENST00000477888 ADCY6O43306 1168 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 ARHGEF15O94989 841 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 SLC25A27O95847 323 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 ARID4AP29374 1257 aaPredicted RBP9□□□□□ -0.97
SPTLC1-205ENST00000477888 MCAMP43121 646 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 CCL23P55773 120 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 TAP1Q03518 808 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 TFCP2Q12800 502 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 GRB10Q13322 594 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms