RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MORN1Q5T089 497 aa20.94■□□□□ 0.94
PTPN7-209ENST00000477554 NBPF11Q86T75 865 aa20.94■□□□□ 0.94
PTPN7-209ENST00000477554 TRIB2Q92519 343 aa20.94■□□□□ 0.94
PTPN7-209ENST00000477554 MKL1Q969V6 931 aa20.94■□□□□ 0.94
PTPN7-209ENST00000477554 SHISA4Q96DD7 197 aa20.94■□□□□ 0.94
PTPN7-209ENST00000477554 SH2D4AQ9H788 454 aa20.94■□□□□ 0.94
PTPN7-209ENST00000477554 BIN2Q9UBW5 565 aaPredicted RBP20.94■□□□□ 0.94
PTPN7-209ENST00000477554 ZMYM6O95789 1325 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 CCL5P13501 91 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 CHMLP26374 656 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 WDR78Q5VTH9 848 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 TICAM2Q86XR7 235 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 SLAIN1Q8ND83 568 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 REPS2Q8NFH8 660 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 GOPCQ9HD26 462 aa20.93■□□□□ 0.94
PTPN7-209ENST00000477554 TSPY2A6NKD2 308 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 ORC4O43929 436 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 TTLL1O95922 423 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 SLC3A2P08195 630 aaKnown RBP20.92■□□□□ 0.94
PTPN7-209ENST00000477554 PTH1RQ03431 593 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 PLEKHH3Q7Z736 793 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 GTF3C2Q8WUA4 911 aaPredicted RBP20.92■□□□□ 0.94
PTPN7-209ENST00000477554 SPATC1LQ9H0A9 340 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 TOMM22Q9NS69 142 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 FLRT1Q9NZU1 646 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 ADAMTS5Q9UNA0 930 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 TAF6LQ9Y6J9 622 aa20.92■□□□□ 0.94
PTPN7-209ENST00000477554 MAPK4P31152 587 aa20.91■□□□□ 0.94
PTPN7-209ENST00000477554 PLS1Q14651 629 aa20.91■□□□□ 0.94
PTPN7-209ENST00000477554 ZNF287Q9HBT7 754 aa20.91■□□□□ 0.94
PTPN7-209ENST00000477554 HOXC10Q9NYD6 342 aa20.91■□□□□ 0.94
PTPN7-209ENST00000477554 PPP1R9AQ9ULJ8 1098 aa20.91■□□□□ 0.94
PTPN7-209ENST00000477554 MTMR7Q9Y216 660 aa20.91■□□□□ 0.94
PTPN7-209ENST00000477554 ERCC3P19447 782 aa20.9■□□□□ 0.94
PTPN7-209ENST00000477554 NPLOC4Q8TAT6 608 aa20.9■□□□□ 0.94
PTPN7-209ENST00000477554 PXYLP1Q8TE99 480 aa20.9■□□□□ 0.94
PTPN7-209ENST00000477554 ZKSCAN3Q9BRR0 538 aa20.9■□□□□ 0.94
PTPN7-209ENST00000477554 RNF208Q9H0X6 261 aa20.9■□□□□ 0.94
PTPN7-209ENST00000477554 STX8Q9UNK0 236 aa20.9■□□□□ 0.94
PTPN7-209ENST00000477554 VWA5AO00534 786 aa20.89■□□□□ 0.94
PTPN7-209ENST00000477554 TAL1P17542 331 aaPredicted RBP20.89■□□□□ 0.94
PTPN7-209ENST00000477554 AKNAD1Q5T1N1 836 aa20.89■□□□□ 0.94
PTPN7-209ENST00000477554 SLFN13Q68D06 897 aa20.89■□□□□ 0.94
PTPN7-209ENST00000477554 STAG1Q8WVM7 1258 aa20.89■□□□□ 0.94
PTPN7-209ENST00000477554 NUDT12Q9BQG2 462 aa20.89■□□□□ 0.94
PTPN7-209ENST00000477554 HIP1O00291 1037 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 PTPREP23469 700 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 MCCP23508 829 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 NOVP48745 357 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 SNAP25P60880 206 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 RCSD1Q6JBY9 416 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 GMCL1P1Q8NEA9 526 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 DSCC1Q9BVC3 393 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 TMEM106CQ9BVX2 250 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 ZNF214Q9UL59 606 aaPredicted RBP20.88■□□□□ 0.93
PTPN7-209ENST00000477554 RIPK3Q9Y572 518 aa20.88■□□□□ 0.93
PTPN7-209ENST00000477554 GRB14Q14449 540 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 KCTD1Q719H9 257 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 CCAR1Q8IX12 1150 aaKnown RBP20.87■□□□□ 0.93
PTPN7-209ENST00000477554 KIFC2Q96AC6 838 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 SLF1Q9BQI6 1058 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 ZNFX1Q9P2E3 1918 aaKnown RBP20.87■□□□□ 0.93
PTPN7-209ENST00000477554 COBLO75128 1261 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
PTPN7-209ENST00000477554 CCNA1P78396 465 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 MAP2K5Q13163 448 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 MFSD6Q6ZSS7 791 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 NCAPG2Q86XI2 1143 aa20.87■□□□□ 0.93
PTPN7-209ENST00000477554 B4E1Z4 1266 aa20.86■□□□□ 0.93
PTPN7-209ENST00000477554 ZNF213O14771 459 aa20.86■□□□□ 0.93
PTPN7-209ENST00000477554 HMGCRP04035 888 aa20.86■□□□□ 0.93
PTPN7-209ENST00000477554 UBXN2AP68543 259 aa20.86■□□□□ 0.93
PTPN7-209ENST00000477554 SOCS4Q8WXH5 440 aa20.86■□□□□ 0.93
PTPN7-209ENST00000477554 DEFB118Q96PH6 123 aa20.86■□□□□ 0.93
PTPN7-209ENST00000477554 TMEM47Q9BQJ4 181 aa20.86■□□□□ 0.93
PTPN7-209ENST00000477554 SMCHD1A6NHR9 2005 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 TMEM232C9JQI7 657 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 SGSM2O43147 1006 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 BMP3P12645 472 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 ADORA2AP29274 412 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 RGS2P41220 211 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
PTPN7-209ENST00000477554 COL9A3Q14050 684 aaPredicted RBP20.85■□□□□ 0.93
PTPN7-209ENST00000477554 TTBK2Q6IQ55 1244 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 MB21D1Q8N884 522 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 APBA2Q99767 749 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
PTPN7-209ENST00000477554 RAVER2Q9HCJ3 691 aaKnown RBP20.85■□□□□ 0.93
PTPN7-209ENST00000477554 PAK6Q9NQU5 681 aaPredicted RBP20.85■□□□□ 0.93
PTPN7-209ENST00000477554 ZNF236Q9UL36 1845 aa20.85■□□□□ 0.93
PTPN7-209ENST00000477554 SLC15A5A6NIM6 579 aa20.84■□□□□ 0.93
PTPN7-209ENST00000477554 KDM4AO75164 1064 aa20.84■□□□□ 0.93
PTPN7-209ENST00000477554 GJB1P08034 283 aa20.84■□□□□ 0.93
PTPN7-209ENST00000477554 PRKAR2AP13861 404 aaKnown RBP20.84■□□□□ 0.93
PTPN7-209ENST00000477554 CCND3P30281 292 aaPredicted RBP20.84■□□□□ 0.93
PTPN7-209ENST00000477554 SLC4A3P48751 1232 aa20.84■□□□□ 0.93
PTPN7-209ENST00000477554 MAP3K21Q5TCX8 1036 aa20.84■□□□□ 0.93
PTPN7-209ENST00000477554 U2AF1L4Q8WU68 220 aaKnown RBP20.84■□□□□ 0.93
PTPN7-209ENST00000477554 ISY1Q9ULR0 285 aaKnown RBP20.84■□□□□ 0.93
PTPN7-209ENST00000477554 FRMPD2Q68DX3 1309 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms