RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SSH3Q8TE77 659 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 ATG4CQ96DT6 458 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 PRKAG2Q9UGJ0 569 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 GRXCR1A8MXD5 290 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 CHGBP05060 677 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 PGK2P07205 417 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 CT47B1P0C2W7 299 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-204ENST00000477429 USP14P54578 494 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 COG2Q14746 738 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 CCDC158Q5M9N0 1113 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 C16orf59Q7L2K0 433 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 SPICE1Q8N0Z3 855 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 ARRDC4Q8NCT1 418 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 MAML3Q96JK9 1138 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 PHF24Q9UPV7 400 aa11.92□□□□□ -0.5
COL4A5-204ENST00000477429 SMCHD1A6NHR9 2005 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 KBTBD13C9JR72 458 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
COL4A5-204ENST00000477429 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
COL4A5-204ENST00000477429 DSG3P32926 999 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 PBX2P40425 430 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 ATP8B2P98198 1209 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 TMEM132BQ14DG7 1078 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 FRAT1Q92837 279 aaPredicted RBP11.91□□□□□ -0.5
COL4A5-204ENST00000477429 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL4A5-204ENST00000477429 RNPC3Q96LT9 517 aaKnown RBP11.91□□□□□ -0.5
COL4A5-204ENST00000477429 TANGO6Q9C0B7 1094 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 FBXO28Q9NVF7 368 aa11.91□□□□□ -0.5
COL4A5-204ENST00000477429 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 MYADML2A6NDP7 307 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 KIAA0355O15063 1070 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 PQBP1O60828 265 aaKnown RBP11.9□□□□□ -0.5
COL4A5-204ENST00000477429 AKR1B1P15121 316 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 DNAJB2P25686 324 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 FAAP100Q0VG06 881 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 PLS1Q14651 629 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 C1orf53Q5VUE5 145 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 NCAPG2Q86XI2 1143 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 THEGQ9P2T0 379 aa11.9□□□□□ -0.5
COL4A5-204ENST00000477429 NOP58Q9Y2X3 529 aaKnown RBP11.9□□□□□ -0.5
COL4A5-204ENST00000477429 ATRXP46100 2492 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 CHD7Q9P2D1 2997 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 A0A1W2PQ45 241 aaPredicted RBP11.89□□□□□ -0.51
COL4A5-204ENST00000477429 A0A1W2PQY0 241 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
COL4A5-204ENST00000477429 ADCY6O43306 1168 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 PRKAB2O43741 272 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 STRNO43815 780 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 GPR37L1O60883 481 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 CLTBP09497 229 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 ZNF865P0CJ78 1059 aaPredicted RBP11.89□□□□□ -0.51
COL4A5-204ENST00000477429 RLBP1P12271 317 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 MRPS5P82675 430 aaKnown RBP11.89□□□□□ -0.51
COL4A5-204ENST00000477429 OS9Q13438 667 aaPredicted RBP11.89□□□□□ -0.51
COL4A5-204ENST00000477429 ADGRE1Q14246 886 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 TTC6Q86TZ1 520 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 LCORLQ8N3X6 602 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 PPM1EQ8WY54 764 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 CABP5Q9NP86 173 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 XPNPEP3Q9NQH7 507 aa11.89□□□□□ -0.51
COL4A5-204ENST00000477429 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 TCRBV5S4A2TA0A5A2 114 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 RBAK-RBAKDNI3L0D1 243 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 ADAMTS4O75173 837 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 ZNF792Q3KQV3 632 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL4A5-204ENST00000477429 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 HOXC10Q9NYD6 342 aa11.88□□□□□ -0.51
COL4A5-204ENST00000477429 DCHS1Q96JQ0 3298 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 NAV1Q8NEY1 1877 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 FLOT1O75955 427 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 POLR3DP05423 398 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-204ENST00000477429 RAG1P15918 1043 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 PDE6AP16499 860 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 PTGS1P23219 599 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 FPGSQ05932 587 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 CCSAPQ6IQ19 270 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-204ENST00000477429 REPS2Q8NFH8 660 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 PRDM12Q9H4Q4 367 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 MROH8Q9H579 483 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 ZNF576Q9H609 170 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 DCP1AQ9NPI6 582 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-204ENST00000477429 ADAMTS5Q9UNA0 930 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 TMX2Q9Y320 296 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 UNC79Q9P2D8 2635 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
COL4A5-204ENST00000477429 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 MAGEB6P1A0A0J9YX57 407 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 SNAI1O95863 264 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-204ENST00000477429 BMP1P13497 986 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 MMP19Q99542 508 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms