RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 FANCBQ8NB91 859 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 SMC1BQ8NDV3 1235 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
PGK1-204ENST00000477335 KIAA1683Q9H0B3 1180 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 VCPKMTQ9H867 229 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 PICK1Q9NRD5 415 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 TRPM7Q96QT4 1865 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 TRIM75PA6NK02 468 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 CYTH3O43739 400 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 FDPSP14324 419 aaKnown RBP10.83□□□□□ -0.68
PGK1-204ENST00000477335 ZNF543Q08ER8 600 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 MOGSQ13724 837 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 BECN1Q14457 450 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 KCTD1Q719H9 257 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 ZNF280CQ8ND82 737 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 SMARCC2Q8TAQ2 1214 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 PHKBQ93100 1093 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 SHISA4Q96DD7 197 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 GPCPD1Q9NPB8 672 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 CSADQ9Y600 493 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 CNTNAP5Q8WYK1 1306 aa10.83□□□□□ -0.68
PGK1-204ENST00000477335 hCG_1642624A0A1W2PR95 340 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 PTPDC1A2A3K4 754 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 IRF6O14896 467 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 TOMM70O94826 608 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 DDIT3P35638 169 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 SLC16A2P36021 539 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 BACE1P56817 501 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 FKBP1BP68106 108 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 FAM83BQ5T0W9 1011 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 SYNE3Q6ZMZ3 975 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 CCDC82Q8N4S0 544 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 GMCL1Q96IK5 515 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 AIFM3Q96NN9 605 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 MAP3K14Q99558 947 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 UBA5Q9GZZ9 404 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 SYNPO2Q9UMS6 1093 aa10.82□□□□□ -0.68
PGK1-204ENST00000477335 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 KLRF2D3W0D1 207 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 RAD21O60216 631 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 PARP1P09874 1014 aaKnown RBP10.81□□□□□ -0.68
PGK1-204ENST00000477335 CALM1P0DP23 149 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 CALM2P0DP24 149 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 CALM3P0DP25 149 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 IFNAR1P17181 557 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 VCAM1P19320 739 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 HMGCS2P54868 508 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 PPATQ06203 517 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 PPIL2Q13356 520 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 CCDC96Q2M329 555 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 SH3D19Q5HYK7 790 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 SAPCD2Q86UD0 394 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 ERO1BQ86YB8 467 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 C2orf69Q8N8R5 385 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 DCAF4Q8WV16 495 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 DDX11Q96FC9 970 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 INTS4Q96HW7 963 aaKnown RBP10.81□□□□□ -0.68
PGK1-204ENST00000477335 WNK4Q96J92 1243 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 C12orf42Q96LP6 360 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 FEZ1Q99689 392 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 FBXO28Q9NVF7 368 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 PTPRFP10586 1907 aa10.81□□□□□ -0.68
PGK1-204ENST00000477335 LOC285556D6RIA3 1793 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 BMP3P12645 472 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 TAL1P17542 331 aaPredicted RBP10.8□□□□□ -0.68
PGK1-204ENST00000477335 GJB2P29033 226 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 SLC1A4P43007 532 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 HUNKP57058 714 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 SNAP25P60880 206 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 MKRN3Q13064 507 aaKnown RBP10.8□□□□□ -0.68
PGK1-204ENST00000477335 PKN1Q16512 942 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 ASPRV1Q53RT3 343 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 TREML2Q5T2D2 321 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 RASAL3Q86YV0 1011 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 CTCFLQ8NI51 663 aaPredicted RBP10.8□□□□□ -0.68
PGK1-204ENST00000477335 PIBF1Q8WXW3 757 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 LLPHQ9BRT6 129 aaKnown RBP10.8□□□□□ -0.68
PGK1-204ENST00000477335 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 AS3MTQ9HBK9 375 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 GOPCQ9HD26 462 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 GJB4Q9NTQ9 266 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 RBM28Q9NW13 759 aaKnown RBP10.8□□□□□ -0.68
PGK1-204ENST00000477335 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
PGK1-204ENST00000477335 A0A0G2JLL6 359 aaPredicted RBP10.79□□□□□ -0.68
PGK1-204ENST00000477335 UNCXA6NJT0 531 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 TMEM232C9JQI7 657 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 CXCL11O14625 94 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
PGK1-204ENST00000477335 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
PGK1-204ENST00000477335 KIF5BP33176 963 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 FOSBP53539 338 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 FSTL1Q12841 308 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 PKP1Q13835 747 aa10.79□□□□□ -0.68
PGK1-204ENST00000477335 SPRYD7Q5W111 196 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms