RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TPM4P67936 248 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 PTGDRQ13258 359 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 IL17AQ16552 155 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 FAM177A1Q8N128 213 aaPredicted RBP13.13□□□□□ -0.31
NUP188-205ENST00000477069 STXBP3O00186 592 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 FANCCQ00597 558 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 GABPAQ06546 454 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 SLFN14P0C7P3 912 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 LMOD1P29536 600 aaPredicted RBP13.12□□□□□ -0.31
NUP188-205ENST00000477069 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 PDILTQ8N807 584 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 LZTS2Q9BRK4 669 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 BARHL2Q9NY43 387 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 UQCRHLA0A096LP55 91 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 UQCRHP07919 91 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 E2F4Q16254 413 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 STX8Q9UNK0 236 aa13.12□□□□□ -0.31
NUP188-205ENST00000477069 GSDMDP57764 484 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 DHX58Q96C10 678 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 MED15Q96RN5 788 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 PCDHA6Q9UN73 950 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 PCDHA8Q9Y5H6 950 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 SCN9AQ15858 1988 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 SMC2O95347 1197 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 FMR1Q06787 632 aaKnown RBP eCLIP13.11□□□□□ -0.318e-7■■■■■ 27.5
NUP188-205ENST00000477069 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
NUP188-205ENST00000477069 VWA3AA6NCI4 1184 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 PDE6BP35913 854 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 DPYDQ12882 1025 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
NUP188-205ENST00000477069 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
NUP188-205ENST00000477069 MYRIPQ8NFW9 859 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 DPF2Q92785 391 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 DDX4Q9NQI0 724 aaKnown RBP13.1□□□□□ -0.31
NUP188-205ENST00000477069 FANCLQ9NW38 375 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
NUP188-205ENST00000477069 ZNF18P17022 549 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 ARMCX5Q6P1M9 558 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 ENOX1Q8TC92 643 aaKnown RBP13.1□□□□□ -0.31
NUP188-205ENST00000477069 MYH4Q9Y623 1939 aa13.1□□□□□ -0.31
NUP188-205ENST00000477069 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 MMP10P09238 476 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 MCM7P33993 719 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 GTF2F1P35269 517 aaKnown RBP eCLIP13.09□□□□□ -0.319e-7■■■■■ 27.6
NUP188-205ENST00000477069 PDXDC2PQ6P474 469 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 APBA3O96018 575 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 DPP8Q6V1X1 898 aaPredicted RBP13.09□□□□□ -0.31
NUP188-205ENST00000477069 TMC6Q7Z403 805 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 RASGRP4Q8TDF6 673 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 ZC3H12CQ9C0D7 883 aaKnown RBP13.09□□□□□ -0.31
NUP188-205ENST00000477069 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 INTS13Q9NVM9 706 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 MYO3BQ8WXR4 1341 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 PARP1P09874 1014 aaKnown RBP13.09□□□□□ -0.31
NUP188-205ENST00000477069 SKILP12757 684 aa13.09□□□□□ -0.31
NUP188-205ENST00000477069 CT47A1Q5JQC4 288 aaPredicted RBP13.09□□□□□ -0.31
NUP188-205ENST00000477069 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 CCDC150Q8NCX0 1101 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 CPVLQ9H3G5 476 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
NUP188-205ENST00000477069 ERCC5P28715 1186 aaPredicted RBP13.08□□□□□ -0.32
NUP188-205ENST00000477069 DOK7Q18PE1 504 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 HHIPL2Q6UWX4 724 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 MTRQ99707 1265 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 PSME4Q14997 1843 aa13.08□□□□□ -0.32
NUP188-205ENST00000477069 USP27XA6NNY8 438 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 LONP1P36776 959 aaKnown RBP13.07□□□□□ -0.32
NUP188-205ENST00000477069 UBASH3AP57075 661 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 CUL4BQ13620 913 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
NUP188-205ENST00000477069 APOBEC3HQ6NTF7 200 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms