RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 MBTPS1Q14703 1052 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 ANKRD44Q8N8A2 993 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 PUS3Q9BZE2 481 aaKnown RBP9.97□□□□□ -0.81
CHD6-207ENST00000476641 BICC1Q9H694 974 aaKnown RBP9.97□□□□□ -0.81
CHD6-207ENST00000476641 ZNF408Q9H9D4 720 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 TNNQ9UQP3 1299 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 JAG2Q9Y219 1238 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 SPEF2Q9C093 1822 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 ZNF804BA4D1E1 1349 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 IRS2Q9Y4H2 1338 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 H7C1D1 291 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 PLIN1O60240 522 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 LILRB5O75023 590 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 HSPA1AP0DMV8 641 aaKnown RBP9.96□□□□□ -0.82
CHD6-207ENST00000476641 HSPA1BP0DMV9 641 aaKnown RBP9.96□□□□□ -0.82
CHD6-207ENST00000476641 SELPP16109 830 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 IFIT5Q13325 482 aaKnown RBP9.96□□□□□ -0.82
CHD6-207ENST00000476641 KIF4BQ2VIQ3 1234 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 USP48Q86UV5 1035 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 KLHDC4Q8TBB5 520 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 DPF2Q92785 391 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 GMLQ99445 158 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 ABT1Q9ULW3 272 aaKnown RBP9.96□□□□□ -0.82
CHD6-207ENST00000476641 NOB1Q9ULX3 412 aaKnown RBP9.96□□□□□ -0.82
CHD6-207ENST00000476641 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 MED23Q9ULK4 1368 aa9.96□□□□□ -0.82
CHD6-207ENST00000476641 USP17L3A6NCW0 530 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 USP17L4A6NCW7 530 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 CELF2O95319 508 aaKnown RBP9.95□□□□□ -0.82
CHD6-207ENST00000476641 ELNP15502 786 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 GRM1Q13255 1194 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 LRP8Q14114 963 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 DACT2Q5SW24 774 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 USP17L1Q7RTZ2 530 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 DEPDC4Q8N2C3 294 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 USP44Q9H0E7 712 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 GGA3Q9NZ52 723 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 PGAP2Q9UHJ9 254 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 LEMD3Q9Y2U8 911 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 UTYO14607 1347 aa9.95□□□□□ -0.82
CHD6-207ENST00000476641 MYH3P11055 1940 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 PTPRCP08575 1304 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 A0A0A0MRY4 1105 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 SFI1A8K8P3 1242 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 RPS12P25398 132 aaKnown RBP9.94□□□□□ -0.82
CHD6-207ENST00000476641 KCNJ4P48050 445 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 RARSP54136 660 aaKnown RBP9.94□□□□□ -0.82
CHD6-207ENST00000476641 ZNF280AP59817 542 aaPredicted RBP9.94□□□□□ -0.82
CHD6-207ENST00000476641 TBC1D8BQ0IIM8 1120 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 CCDC57Q2TAC2 916 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 LRRC24Q50LG9 513 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 TAF7LQ5H9L4 462 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 COL13A1Q5TAT6 717 aaPredicted RBP9.94□□□□□ -0.82
CHD6-207ENST00000476641 CYP4F22Q6NT55 531 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 BHMTQ93088 406 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 ANKRD2Q9GZV1 360 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 PCDHAC2Q9Y5I4 1007 aa9.94□□□□□ -0.82
CHD6-207ENST00000476641 RASSF10A6NK89 507 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 PSMA6P60900 246 aaKnown RBP9.93□□□□□ -0.82
CHD6-207ENST00000476641 RAC1P63000 192 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 TYRO3Q06418 890 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 ALDH1L2Q3SY69 923 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 RABL6Q3YEC7 729 aaPredicted RBP9.93□□□□□ -0.82
CHD6-207ENST00000476641 C1orf53Q5VUE5 145 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 PRAMEF18Q5VWM3 479 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 LDHAL6AQ6ZMR3 332 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 KRT26Q7Z3Y9 468 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 CERS5Q8N5B7 392 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 KRTAP4-12Q9BQ66 201 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 COA1Q9GZY4 146 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 CD209Q9NNX6 404 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 CNNM1Q9NRU3 951 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 HCN4Q9Y3Q4 1203 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 CACNA1FO60840 1977 aa9.93□□□□□ -0.82
CHD6-207ENST00000476641 AOX1Q06278 1338 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 FOXN1O15353 648 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 AOC2O75106 756 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 BCAR3O75815 825 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 SASH1O94885 1247 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 HNRNPUQ00839 825 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHD6-207ENST00000476641 NRG1Q02297 640 aaPredicted RBP9.92□□□□□ -0.82
CHD6-207ENST00000476641 DEFB115Q30KQ5 88 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 NBPF9Q3BBW0 867 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 LCE3BQ5TA77 95 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 ANGEL2Q5VTE6 544 aaKnown RBP9.92□□□□□ -0.82
CHD6-207ENST00000476641 SHISA2Q6UWI4 295 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 CDC37L1Q7L3B6 337 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 KIAA0825Q8IV33 1275 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 AGBL3Q8NEM8 1001 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 LENG1Q96BZ8 264 aaPredicted RBP9.92□□□□□ -0.82
CHD6-207ENST00000476641 UBE2OQ9C0C9 1292 aaKnown RBP9.92□□□□□ -0.82
CHD6-207ENST00000476641 PHACTR1Q9C0D0 580 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 TSPAN10Q9H1Z9 355 aaPredicted RBP9.92□□□□□ -0.82
CHD6-207ENST00000476641 ALG2Q9H553 416 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 JPH1Q9HDC5 661 aaPredicted RBP9.92□□□□□ -0.82
CHD6-207ENST00000476641 MYOZ2Q9NPC6 264 aa9.92□□□□□ -0.82
CHD6-207ENST00000476641 WDR33Q9C0J8 1336 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms